Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01517 ATGGGAATATTTGGTGCTCTACCGCTGCTGCATACTTTGATATGGCTGTTTCTTAGTGGTTCGATCTGGTGCCAAAAGGCAGTTGTGGTAAATATTGGTGCGGTTTTTACTTTCAACTCGGTTATTGGTAGAGCAGCAAAGCCGGCGATGGAAGCAGCAATCGCCGACATAAATACTGACCCCAACATCTTGAGTGGGACAAAGGTGAAGCTCCTGATGGAGGACTCTAACTGCAGCGACTTCTTGGGCTCTGTTGGGGCTTTGCATGTACTTGAGAAAGAGATCGTTGCCATCATTGGCCCACAATCCTCGGTGGTGGCTCATGTGATTTCTGAGCTTGTTAATGGTCTACAAATTCCTCAAGTATCATATGGTGCCACTGATCCAACATTATCGACTCTCCAACTCCCTTTCTTCCTCCGAACCACTTTAAGTGACTCTTACCAAATGGCTGCCATGGCTGACTTGATTGATTACTATGGGTGGAAAGAGGTCATTGTTATATTTTTGGATGATGATTATGGGAGAAATGGGATATCTTCTTTGGGTGATGAACTTCAGAAGAAAATGTGTCGTATTGCTCATGGATTTGGCTTGCCTTCTCTGGCTAATATTACTAAGATCACGGAGATACTTAACCAATCTAAATTGCTCGGTCCTCGTGTTTATGTCGTTCACGTCGGCCCCGATCCTCAATTAAGAATCTTCACCATCGCCCATAAACTTGGTATGCTTTCCAGCAATTACGTTTGGTTTGCAACTGATTGGCTTGCCACAACTCTAGATTCTTTTTCACCAACAGATCTTGCTTCACTTGATATACTTAATGGGGTAGTGGGGCTACGCTCTCATACTCAAGAGTCTAAAGGAAAGAAGGATTTGTGGAATCGTTTGAGCAAAATGCAGCCCAAAGGTTTGGCCAATTCTGTGTTGAATGTTTATGGACTGTATGCTTATGATTCAGTATGGGTTGTTGCCAGGGCAGTGGATAAGTTTCTCAAAGAAAATGGTAATATAACCTTTTCATCTACAGGTAAAGTCTTTGGCACTAGTAAAAGTGGAATTCAACTAGGAAGGCTTAAAGTGTTTAATGGAGGAAGTGATCTTCTTAGGATTATTATGCAAACAAATTACAGTGGTTTAAGTGGGCGAATTCAGTTTGGTGAAGACAGAAATATCATCAATGGTAGCTATGATGTGATTAATATTGACCAAAAGGAAATTCGTACGGTGGGTTATTGGTTTAACTACTCAGGATTCTCGATTTCACCACCAGAAGCCTTGACATTGAAACAAAAAGATTCCCCCTTAGATCAGAAACTCGACATTGTAGTTTGGCCTGGTGGAAACTCAAAAATACCAAACGGTTGGGTGATAGCAGACGCTGGAAAGCCCCTAAGAATTGCATATCCAAGAAGAGCAAGCTTTGTTGAGTTTGTTACTCAAGTGAACAACACCAATATAGTTCAAGGATACGTAATTGATATTTTCAAAGCAGCACTCAAGCTTATTCCATATGAAGTTCCTTACAAATTTGTGCCGTTTGGGGATGGTCTTGTCAATCCTAGTTACGATGAACTCGTTCAATCGGTTGCAGATAGTGTGTTTGATGCAGCTGTTGGGGACATTGCTATTGTTACCAACCGTACAAAGGTTCAGCTTTTCAACTCTGTTCAAGGCTAA 1683 41.71 MGIFGALPLLHTLIWLFLSGSIWCQKAVVVNIGAVFTFNSVIGRAAKPAMEAAIADINTDPNILSGTKVKLLMEDSNCSDFLGSVGALHVLEKEIVAIIGPQSSVVAHVISELVNGLQIPQVSYGATDPTLSTLQLPFFLRTTLSDSYQMAAMADLIDYYGWKEVIVIFLDDDYGRNGISSLGDELQKKMCRIAHGFGLPSLANITKITEILNQSKLLGPRVYVVHVGPDPQLRIFTIAHKLGMLSSNYVWFATDWLATTLDSFSPTDLASLDILNGVVGLRSHTQESKGKKDLWNRLSKMQPKGLANSVLNVYGLYAYDSVWVVARAVDKFLKENGNITFSSTGKVFGTSKSGIQLGRLKVFNGGSDLLRIIMQTNYSGLSGRIQFGEDRNIINGSYDVINIDQKEIRTVGYWFNYSGFSISPPEALTLKQKDSPLDQKLDIVVWPGGNSKIPNGWVIADAGKPLRIAYPRRASFVEFVTQVNNTNIVQGYVIDIFKAALKLIPYEVPYKFVPFGDGLVNPSYDELVQSVADSVFDAAVGDIAIVTNRTKVQLFNSVQG 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12219952 12225008 - Carg19073-RA Car11g01517 157470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01517 560 Pfam Receptor family ligand binding region 47 404 IPR001828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01517 Car-Chr11:12219952 Car20g00530 Car-Chr20:2921825 0 dispersed
Car11g01517 Car-Chr11:12219952 Car02g00139 Car-Chr2:810503 1.60E-143 wgd
Car11g01517 Car-Chr11:12219952 Car20g00529 Car-Chr20:2910769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01517 K05387 - csv:101203158 850.121