Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01524 ATGGCCATTTCTCCCAACCTTTTTTCCCTTCTCTTTTTGCAGCTAATGCTCGCCTCGTCTCTCTCGACCATCGCCGAAGCGCATGGCTTGTCGTCTAAGTTTTATCGGTACACCTGCCCCGGGTTGGAGTATACTGTCGCCAAAACGGTGGCTTTGTATATTCAGAAACAACCTACTCTAGCAGCTGCTTTATTGAGAATGCACTTCCACGACTGCTTCGTTAGGGGTTGTGACGGTTCTGTGCTGCTAAATTCGACACCAAACAACCAAGCCGAGAAAGATTCTATTCCCAACCTTACTTTAAGAGGCTACAATGTCGTCGACGCTGTTAAAGCTGCTGTTGAAAAGCAGTGCCCTGGCGTTGTTTCATGTGCTGATATCCTCGCTTTGGTGGCTCGTGATGCCGTTAGAATGATTGGAGGCCCATTCTGGAATGTTCCAACAGGGAGAAGAGACGGAACTGTGTCGATCTCAAGAGAAGCCCTAATCAATTTGCCGCCTCCCTTCGCCAACATCTCATCTCTCAAAACAAGTTTCCTCTCCCTAGGTCTCTCCGTCAAAGATCTCGTCGTTTTATCCGGAGCACACACGATCGGAGTTTCGAAATGCAGCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCATAGGCGACGCCGATCCGAAATTAGACAAATACTACGCCGTCGCATTGAAAGGTAAATGCAAGCCAAACGACCAGAAATCGATCGTCGAGATGGATCCAGGAAGCTTCAAGACCTTCGATGGAAGTTACTACACTCTCGTCTCCAAGAGAAGAGGTTTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGACACCAAAGCCTACGTTGTATTACAAGCACAAACACGCGGCGCTACTTTCGCCGTCGATTTCGCTGAATCGATGATCAGTATGGGACAGATCGGCGTCCTCACCGGCAACGACGGCGAAATTAGGCGCCAATGTAGACTTGCTAGCTCAACTCAAGCTCACCTCCAGCTCGGCTACTATGCAAAGACCTGCCCTCGTGCCGAGAAAATTATCACCGAGTTCGTCTACAAGAGCGTTCCCAAGGTTCCCACCTTGGCTGCTGCCTTCATTCGGATGCATTTTCACGATTGCTTCGTTCGGGGTTGTGATGCATCTGTACTTCTGAACTCGACTGCCGGTAACCCGAGTGAGAAGGAATCTCCGCCGAATCTAACATTGAGAGGCTTCGATTTCCTTGATAAAATCAAGAAGCTTTTGGAAGATGAGTGCCCTGGAATCGTCTCATGCTCCGACATTCTTTCTTTGGTTACAAGAGACTCGATCGTTTCCATTGGCGGTCCATTTTGGAGGGTTCCAACAGGAAGAAGAGACGGAGTGATCTCGAGATCATCAGAAGCTTTAGCGAACATTCCACCACCGTTTGCTAACTTGTCGACTCTCGAACGACAATTCGCCAACCAGGGTCTCGATCTAAAAGACTTGGTTTTGTTATCAGGAGCTCACACCATTGGGATATCCCATTGCTCATCATTCACAAGGCGGCTATACAACTTCACAGGAGTGGGAGACCAAGACCCATCATTGGACTCCGAGTACGCCGCCAATCTAAAGGCAAAGAAATGCAAAAGCATACGCGCCAACGACATCGTCGAAATGGACCCTGGCAGCTTCCGGACCTTCGACCTCAGCTACTACTCTCTGCTCCTCAAGCGCCGTGGGCTGTTCCAGTCCGACGCCGCGCTGACCACCAGCCCGGTCACCAAGGCCTTCGTTACTGACCTTCTCAACGGTTCGGTTAAGAATTTCTTCGCCGAGTTCGGGTTAGCCATGGAGAAGATGGGTCGGATCGGGGTCAAGACCGGCACCGAGGGGGAGATTCGCAAGCATTGTGCTCTTGTTAATGCTTGA 1905 50.34 MAISPNLFSLLFLQLMLASSLSTIAEAHGLSSKFYRYTCPGLEYTVAKTVALYIQKQPTLAAALLRMHFHDCFVRGCDGSVLLNSTPNNQAEKDSIPNLTLRGYNVVDAVKAAVEKQCPGVVSCADILALVARDAVRMIGGPFWNVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSLGLSVKDLVVLSGAHTIGVSKCSSFSNRLYNFTGIGDADPKLDKYYAVALKGKCKPNDQKSIVEMDPGSFKTFDGSYYTLVSKRRGLFQSDSALLDDPDTKAYVVLQAQTRGATFAVDFAESMISMGQIGVLTGNDGEIRRQCRLASSTQAHLQLGYYAKTCPRAEKIITEFVYKSVPKVPTLAAAFIRMHFHDCFVRGCDASVLLNSTAGNPSEKESPPNLTLRGFDFLDKIKKLLEDECPGIVSCSDILSLVTRDSIVSIGGPFWRVPTGRRDGVISRSSEALANIPPPFANLSTLERQFANQGLDLKDLVLLSGAHTIGISHCSSFTRRLYNFTGVGDQDPSLDSEYAANLKAKKCKSIRANDIVEMDPGSFRTFDLSYYSLLLKRRGLFQSDAALTTSPVTKAFVTDLLNGSVKNFFAEFGLAMEKMGRIGVKTGTEGEIRKHCALVNA 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12264702 12270636 + Carg19080-RA Car11g01524 157477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01524 634 ProSiteProfiles Plant heme peroxidase family profile. 333 633 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car11g01524 634 Pfam Peroxidase 353 592 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car11g01524 634 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car11g01524 634 ProSitePatterns Peroxidases active site signature. 365 376 IPR019794 GO:0004601
Car11g01524 634 ProSiteProfiles Plant heme peroxidase family profile. 29 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car11g01524 634 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Car11g01524 634 ProSitePatterns Peroxidases proximal heme-ligand signature. 492 502 IPR019793 -
Car11g01524 634 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01006 Car-Chr2:7084113 Car11g01524 Car-Chr11:12264702 7.37E-19 dispersed
Car11g01524 Car-Chr11:12264702 Car20g00038 Car-Chr20:206365 4.92E-32 dispersed
Car12g00372 Car-Chr12:2373390 Car11g01524 Car-Chr11:12264702 5.71E-81 dispersed
Car18g00708 Car-Chr18:8285597 Car11g01524 Car-Chr11:12264702 6.48E-75 dispersed
Car19g00872 Car-Chr19:9061533 Car11g01524 Car-Chr11:12264702 5.30E-60 dispersed
Car08g01073 Car-Chr8:7309057 Car11g01524 Car-Chr11:12264702 3.68E-99 transposed
Car18g00627 Car-Chr18:7477508 Car11g01524 Car-Chr11:12264702 3.06E-24 transposed
Car11g01524 Car-Chr11:12264702 Car02g00133 Car-Chr2:772945 8.22E-08 wgd
Car11g01524 Car-Chr11:12264702 Car20g00522 Car-Chr20:2881603 7.48E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01524 K00430 - gsj:114405310 625.935