Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01524 | ATGGCCATTTCTCCCAACCTTTTTTCCCTTCTCTTTTTGCAGCTAATGCTCGCCTCGTCTCTCTCGACCATCGCCGAAGCGCATGGCTTGTCGTCTAAGTTTTATCGGTACACCTGCCCCGGGTTGGAGTATACTGTCGCCAAAACGGTGGCTTTGTATATTCAGAAACAACCTACTCTAGCAGCTGCTTTATTGAGAATGCACTTCCACGACTGCTTCGTTAGGGGTTGTGACGGTTCTGTGCTGCTAAATTCGACACCAAACAACCAAGCCGAGAAAGATTCTATTCCCAACCTTACTTTAAGAGGCTACAATGTCGTCGACGCTGTTAAAGCTGCTGTTGAAAAGCAGTGCCCTGGCGTTGTTTCATGTGCTGATATCCTCGCTTTGGTGGCTCGTGATGCCGTTAGAATGATTGGAGGCCCATTCTGGAATGTTCCAACAGGGAGAAGAGACGGAACTGTGTCGATCTCAAGAGAAGCCCTAATCAATTTGCCGCCTCCCTTCGCCAACATCTCATCTCTCAAAACAAGTTTCCTCTCCCTAGGTCTCTCCGTCAAAGATCTCGTCGTTTTATCCGGAGCACACACGATCGGAGTTTCGAAATGCAGCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCATAGGCGACGCCGATCCGAAATTAGACAAATACTACGCCGTCGCATTGAAAGGTAAATGCAAGCCAAACGACCAGAAATCGATCGTCGAGATGGATCCAGGAAGCTTCAAGACCTTCGATGGAAGTTACTACACTCTCGTCTCCAAGAGAAGAGGTTTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGACACCAAAGCCTACGTTGTATTACAAGCACAAACACGCGGCGCTACTTTCGCCGTCGATTTCGCTGAATCGATGATCAGTATGGGACAGATCGGCGTCCTCACCGGCAACGACGGCGAAATTAGGCGCCAATGTAGACTTGCTAGCTCAACTCAAGCTCACCTCCAGCTCGGCTACTATGCAAAGACCTGCCCTCGTGCCGAGAAAATTATCACCGAGTTCGTCTACAAGAGCGTTCCCAAGGTTCCCACCTTGGCTGCTGCCTTCATTCGGATGCATTTTCACGATTGCTTCGTTCGGGGTTGTGATGCATCTGTACTTCTGAACTCGACTGCCGGTAACCCGAGTGAGAAGGAATCTCCGCCGAATCTAACATTGAGAGGCTTCGATTTCCTTGATAAAATCAAGAAGCTTTTGGAAGATGAGTGCCCTGGAATCGTCTCATGCTCCGACATTCTTTCTTTGGTTACAAGAGACTCGATCGTTTCCATTGGCGGTCCATTTTGGAGGGTTCCAACAGGAAGAAGAGACGGAGTGATCTCGAGATCATCAGAAGCTTTAGCGAACATTCCACCACCGTTTGCTAACTTGTCGACTCTCGAACGACAATTCGCCAACCAGGGTCTCGATCTAAAAGACTTGGTTTTGTTATCAGGAGCTCACACCATTGGGATATCCCATTGCTCATCATTCACAAGGCGGCTATACAACTTCACAGGAGTGGGAGACCAAGACCCATCATTGGACTCCGAGTACGCCGCCAATCTAAAGGCAAAGAAATGCAAAAGCATACGCGCCAACGACATCGTCGAAATGGACCCTGGCAGCTTCCGGACCTTCGACCTCAGCTACTACTCTCTGCTCCTCAAGCGCCGTGGGCTGTTCCAGTCCGACGCCGCGCTGACCACCAGCCCGGTCACCAAGGCCTTCGTTACTGACCTTCTCAACGGTTCGGTTAAGAATTTCTTCGCCGAGTTCGGGTTAGCCATGGAGAAGATGGGTCGGATCGGGGTCAAGACCGGCACCGAGGGGGAGATTCGCAAGCATTGTGCTCTTGTTAATGCTTGA | 1905 | 50.34 | MAISPNLFSLLFLQLMLASSLSTIAEAHGLSSKFYRYTCPGLEYTVAKTVALYIQKQPTLAAALLRMHFHDCFVRGCDGSVLLNSTPNNQAEKDSIPNLTLRGYNVVDAVKAAVEKQCPGVVSCADILALVARDAVRMIGGPFWNVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSLGLSVKDLVVLSGAHTIGVSKCSSFSNRLYNFTGIGDADPKLDKYYAVALKGKCKPNDQKSIVEMDPGSFKTFDGSYYTLVSKRRGLFQSDSALLDDPDTKAYVVLQAQTRGATFAVDFAESMISMGQIGVLTGNDGEIRRQCRLASSTQAHLQLGYYAKTCPRAEKIITEFVYKSVPKVPTLAAAFIRMHFHDCFVRGCDASVLLNSTAGNPSEKESPPNLTLRGFDFLDKIKKLLEDECPGIVSCSDILSLVTRDSIVSIGGPFWRVPTGRRDGVISRSSEALANIPPPFANLSTLERQFANQGLDLKDLVLLSGAHTIGISHCSSFTRRLYNFTGVGDQDPSLDSEYAANLKAKKCKSIRANDIVEMDPGSFRTFDLSYYSLLLKRRGLFQSDAALTTSPVTKAFVTDLLNGSVKNFFAEFGLAMEKMGRIGVKTGTEGEIRKHCALVNA | 634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12264702 | 12270636 | + | Carg19080-RA | Car11g01524 | 157477 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01524 | 634 | ProSiteProfiles | Plant heme peroxidase family profile. | 333 | 633 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car11g01524 | 634 | Pfam | Peroxidase | 353 | 592 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car11g01524 | 634 | Pfam | Peroxidase | 47 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car11g01524 | 634 | ProSitePatterns | Peroxidases active site signature. | 365 | 376 | IPR019794 | GO:0004601 | |
Car11g01524 | 634 | ProSiteProfiles | Plant heme peroxidase family profile. | 29 | 328 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car11g01524 | 634 | ProSitePatterns | Peroxidases active site signature. | 61 | 72 | IPR019794 | GO:0004601 | |
Car11g01524 | 634 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 492 | 502 | IPR019793 | - | |
Car11g01524 | 634 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g01006 | Car-Chr2:7084113 | Car11g01524 | Car-Chr11:12264702 | 7.37E-19 | dispersed | |
Car11g01524 | Car-Chr11:12264702 | Car20g00038 | Car-Chr20:206365 | 4.92E-32 | dispersed | |
Car12g00372 | Car-Chr12:2373390 | Car11g01524 | Car-Chr11:12264702 | 5.71E-81 | dispersed | |
Car18g00708 | Car-Chr18:8285597 | Car11g01524 | Car-Chr11:12264702 | 6.48E-75 | dispersed | |
Car19g00872 | Car-Chr19:9061533 | Car11g01524 | Car-Chr11:12264702 | 5.30E-60 | dispersed | |
Car08g01073 | Car-Chr8:7309057 | Car11g01524 | Car-Chr11:12264702 | 3.68E-99 | transposed | |
Car18g00627 | Car-Chr18:7477508 | Car11g01524 | Car-Chr11:12264702 | 3.06E-24 | transposed | |
Car11g01524 | Car-Chr11:12264702 | Car02g00133 | Car-Chr2:772945 | 8.22E-08 | wgd | |
Car11g01524 | Car-Chr11:12264702 | Car20g00522 | Car-Chr20:2881603 | 7.48E-47 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01524 | K00430 | - | gsj:114405310 | 625.935 |