Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01549 ATGGGTTGGAGATCTCTGAGGAGTGCCAATTTGAGGATCTTGGCACAGGTTTTAGTCGGATTCGTGATCTGTGCAGCACAAGTTCTTCTCGGAATTACGAATCCAGGCGATTTTGCTGCTATTAGTAGCTTTCATACTGCGCTGGGGCTCCCCAATCTTCCTGGATGGGGCATTGGGCAAGACCCATGCGGAGACGCATGGCAGGGTGTTGTTTGTAATGATTCAAATATCATTAAAATAGTTGTTAATGCTGCTAATTTGGGAGGTGAACTCGGTGATAGCTTGGGACTGTTTTCTTCTATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATTCCATCAAGTTTACCCGTTACCATGCAGAACTTGTTTCTTTCAGCTAACGAGTTCACTGGAAGCATTCCAAGTTCATTATCATCTTTGATTCAACTGTCCGCCATGTCGTTGAACGACAACAAATTGAGTGGAGAAATACCAGATTCCTTTCAAGCCATTACTCAATTGGTCAATTTGGACTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGCAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAATAATCAACTATCAGGGACCCTTGATGTTCTACAAGATCTTCCACTAAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGTTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCGACGCTTCCTCCTTCTGTATCTCCATCACCACCGTCACCGTCAAAGCCAGCACCACCACCAGCACCGCCTGTTCCTGAAGCACGACCATCTTCTCAACAAAAACCAAAGAATCAGGCTGATGGACCATCAGCGCCTGAGGAATTGAGCACTGGAAGAAATAAGAAAAACACTAAAAGGGTTGCTTTGATAACACTTGCAGCTGTATTGTCATTCATAATCTTGGTTTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGAACGGTTGATAGTATTTCCAAGCGACGTCATCAGATAGGTGCTTATAGGGCTGAGAGAGAGAATGCTGGCAATGACGGATCCATGCGCCCTCCAGTTGATCAGATACCTAAAGTTCCGATCGAGGCAGTAGTAAGGCCGAAGCAGGAAACTCAAATAGAAGCTCAGAAGGTCCCAAAAGCTCATGAAGAGAGAGAGACAAACATGCCAAGAATGAGTGCTATACCGAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCGCCCCCTCCCCCACCACCTCCCCCTCCACCACCACCACCTCCTATTGAAGAGGTCACTGCTGTGCCCAGTGTTCCAGCCGAAGTTCTTCCCTTGAAGCCTCCCACCAAACATAGAACTACCTCAACTTTTGCAAAATCTTTCACCATTGCGTCCCTACAGCAGTATACAAACAGCTTTTCACCGGAGAATCTTCTTGGAGAAGGTATGCTGGGGACTGTTTATAGGGCCCAGCTCCCCAGTGGGAAGCTACTGGCCGTCAAGAAACTGGATAAAAGAGCATTCAATCAACAAAAAGACGACGAGTTTCTTGAGTTAGTGAATAATATCGATAGAATCCGGCATGCTAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGCGAAAGGCTTCTTATCTATGAGTATTGCAGTGGTGGAACATTGCAGGATGCGTTGCACTCAGATGAAGAGTTTAGGAAGAACCTTTCTTGGAACGCCCGCATTCGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAATTTCAAGTCTGCAAATGTCCTACTCGATGATGAGTTTTCAGTCCGTGTTTCGGATTGCGGTCTGGCTCCATTGATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTGACAGCATATGGTTATGGGGCGCCAGAATTTGAATCGGGAGTTTATACACTCGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTCACGGGACGGATGTCTTACGACAGAACAAGGACCCGAGGTGAGCAGTTCTTAGTCAGATGGGCGATTCCACAGCTTCATGACATAGAGGCATTGACGAGCATGGTCGATCCTTCACTCAATGGTCGATATCCTGCCAAATCCTTGTCGTACTTCGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCGATGTCGACGGTTGTTCAGGACTTGCTGAGCATGATAAGGAGAGAACCAAATGGCAGTGGTCCAAGTGAAGGTTGA 2355 46.03 MGWRSLRSANLRILAQVLVGFVICAAQVLLGITNPGDFAAISSFHTALGLPNLPGWGIGQDPCGDAWQGVVCNDSNIIKIVVNAANLGGELGDSLGLFSSIQTIDLSNNHIGGSIPSSLPVTMQNLFLSANEFTGSIPSSLSSLIQLSAMSLNDNKLSGEIPDSFQAITQLVNLDLSNNNLSGPLPPSASNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNSSVSPTLPPSVSPSPPSPSKPAPPPAPPVPEARPSSQQKPKNQADGPSAPEELSTGRNKKNTKRVALITLAAVLSFIILVLACVLFMPRCRRRTVDSISKRRHQIGAYRAERENAGNDGSMRPPVDQIPKVPIEAVVRPKQETQIEAQKVPKAHEERETNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPIEEVTAVPSVPAEVLPLKPPTKHRTTSTFAKSFTIASLQQYTNSFSPENLLGEGMLGTVYRAQLPSGKLLAVKKLDKRAFNQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSGGTLQDALHSDEEFRKNLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDEFSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSTVVQDLLSMIRREPNGSGPSEG 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12382664 12389972 - Carg19105-RA Car11g01549 157502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01549 784 MobiDBLite consensus disorder prediction 257 283 - -
Car11g01549 784 Pfam Protein tyrosine and serine/threonine kinase 498 768 IPR001245 GO:0004672|GO:0006468
Car11g01549 784 MobiDBLite consensus disorder prediction 247 307 - -
Car11g01549 784 ProSiteProfiles Protein kinase domain profile. 494 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01549 Car19g00763 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00427 Car-Chr3:4843370 Car11g01549 Car-Chr11:12382664 1.31E-17 dispersed
Car11g01549 Car-Chr11:12382664 Car01g00018 Car-Chr1:92178 9.16E-165 dispersed
Car11g01549 Car-Chr11:12382664 Car19g00763 Car-Chr19:8416121 0 wgd
Car11g01549 Car-Chr11:12382664 Car03g00426 Car-Chr3:4840842 5.52E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89204 PF07714 PK_Tyr_Ser-Thr 5.20E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01549 - - csv:101213734 1227.23