Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01556 ATGTCGGAGGACACGATCTTTTGTGGCGTGTTCGATGGTCACGGACCTTACGGGCATCTCGTTGCTCGAAAAGTTAGGGATACATTGCCTATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAAGAACTCTGCTAAAACGTGTTTCCAGAGGAATTTGAAGACGCCTCGAGAATGTGACGATTCTGATAAGGATCGTTTTATCGAGGACTCGCTGAATTCGGTATGGAGAGATGCGTTTTTGAACTCGTATAAAGCTATGGATAAGGAGCTGAGATCACACCCTAATCTGGACTGCTTTTGTAGTGGTAGCACTGCAGTCACCATTGTTAAACAGGGGTCGAATCTGTTCGTGGGGTATATCGGAGACTCTCGTGCAATCCTTGCTTCAAAGGACGTCAATGACTCGACTGTGGCGGTTCAATTGACCGTCGATCTTAAGCCAGATTTGCCGAGAGAAGCTGAAAGAATCAAAAGGTGTAAAGGTAGAGTTTTTGCATTGCAAGATGAGCCTGAAGTTTCAAGGGTATGGTTACCTTTCGACGATGCGCCCGGTTTAGCTATGGCTCGAGCATTTGGCGATTTCTGTTTGAAAGAATACGGAGTTATCTCTATACCTGAATTCTCTCATCGAACGCTCACCGACGCCGATCAGTTCATTGTTCTTGCATCAGATGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGAAATAGTGTCCTCGACCCCGACTCGCTCGTCTGCTGCGAGGTCTGTGGTTGACTCTGCTGCTCGTGAATGGAAGCTCAAATACCCCACCTCGAAAATGGACGACTGTGCTGTCGTCTGCTTGTTTCTCGACGGGAAGATGGACTCTGAATCTGACTGTGAAGAACAAGGCTTCTCATCTGCAACATTGCGGAGTAATCATTCGAGTACTGCTGTCGAATCCGACGATGGCCAGAGGTCCGAGCCATGCTTGCAAAGGAACAACACTGTCAGATCATCAGAAGATAGCAGTAGTTTTGGAGGATTACCAGTCGACGACGGGGAGACCGGTGATGCTGTACCTGCAGACGATCAAAACTGGTCGGGTTTAGAAGGAGTCACTCGAGTAAACTCGCTTGTTCAACTTCCTAGATTCTCTGATGAAAGGCCAGTGTCATAG 1158 47.58 MSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQKNSAKTCFQRNLKTPRECDDSDKDRFIEDSLNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFVGYIGDSRAILASKDVNDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVEIVSSTPTRSSAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCEEQGFSSATLRSNHSSTAVESDDGQRSEPCLQRNNTVRSSEDSSSFGGLPVDDGETGDAVPADDQNWSGLEGVTRVNSLVQLPRFSDERPVS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12414585 12417744 - Carg19112-RA Car11g01556 157509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01556 385 Pfam Protein phosphatase 2C 72 261 IPR001932 -
Car11g01556 385 ProSiteProfiles PPM-type phosphatase domain profile. 1 283 IPR001932 -
Car11g01556 385 MobiDBLite consensus disorder prediction 298 339 - -
Car11g01556 385 MobiDBLite consensus disorder prediction 298 364 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00099 Car11g01556 CCT
Car11g01556 Car19g00768 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01556 Car-Chr11:12414585 Car20g00496 Car-Chr20:2748724 0 dispersed
Car11g01556 Car-Chr11:12414585 Car19g00768 Car-Chr19:8444350 0 wgd
Car11g01556 Car-Chr11:12414585 Car02g00099 Car-Chr2:637029 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01556 - - csv:101204594 708.753