Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01567 ATGGATGAATCTCTGCTCGGTGTAGAAAGTAGCAGCAGCTCCAGCTCTCGACGTCAGATTCCTCATGTGAAGTTCAAGCGCCGCTCCGACGCCATCGCTTATGGCTCTGCGTACCAAAGAGCTGCTGCACTCGTGGATCTGGCTGAAGATGGCGTTGGTATACCCGAGAAAATCCTTGATCAGTCGAACTTTCAGAGTGCTGCAAAGCTCTACTTCATTTTTATTAAATTTGATTTGATTTGGTCTGTAAATTTCTTTGCGCTGGTAGTCCTAAATTTCTTTGAGAAACCCTTGTGGTGCTCCAAATACGATACGCATTCTTGTAACGACAGAGAGTATTTCTTTCTTGGGCAGTTGCCTTACTTAACAGCTGTTGAATTTCTTATATATGAGGCTGTGACTCTCATAATACTCATGATACACACTTTTTTCCCAATTTCGTTTGAAGGAGCCCAGCTTTATTGGAAAAATCCCTTGAACCAGTTGAAGGTCATATGCTTAATTATTTTGGTGGCCGATTTTCTCATTTATACCCTATATTTGTCACCAGTGGCCTTTGATTATCTTCCATTCAGAGTTGCACCGTATATTAGAGTTGTCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATCATCATTCTAGCTGGAATGCTCGGCACATACTTGAATGTCTTGGCTCTATGGTTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCATACGTTATTTTTGAGGATACACAGCAGGGGAAATTATTATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACAACATCTAATAATCCAAATGTTTGGATACCTGCCTACAAGGCATCTCGTTGGTATTGCTTGTTTTTTGTTCTGTACGTGCTGTTGGGAGTTTACTTCGTTACAAACTTGATTCTTGCTGTTGTATACGATAGCTTTAAGAGCCAGCTGGCTAAACAAATTTCTGAGATGGACCGCTTGAGGAAAAGTATATTGGCCAAAGCATTTAGTCTTATGGATACTGATAACGTTGGGTTTATCAATAAACAGCAGTGCCTTATACTTCTTGAAGAACTTAACAGATACAGGACTTTGCCAAAGATATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATCAATATGAATGAGTTTGCTGATCTTTGCAATGCTATAGCCTTGAAGTTTCAGAAGGAGGACATTCCTTCAGTGTTTGAAGCGTATCCTTCGATCTACAATTCAGTTTCTTCAAAAAAGTTGAAAGCATTTGTGCGGAGCCCCTCATTTGGATATGCTATATCCTTTATCCTCATACTGAACCTGGTTGCTGTTATTATTGAAACAACACTCGATATAGAAAATAATGTTGGACAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTGGTTGAAATGGCTCTAAAAATCTACGCGTTTGGATTTATGAATTATTGGAGAGATGGCCAAAATCAGTTTGATTTCCTTGTTACATGGATTATAGTGATTGGAGAAACCATGACTTTTGTGGCACCTAGTGGACTAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGCCTGATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCATTTCTTGCTACCTTTTTAACTCTCATCCCTAGCTTGATGCCATATCTAGGAACTATTTTCTGTGTCCTCTGCCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGACTTGTTAACGCTGGAAATCCTGCTTTGTCTAAGACTGATCTGGATGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACACTGTTCAATTTGCTAGTTATGGGCAACTGGCAAGACTGGATGCAGAGCTACAAGGAGTTAACAGGAAGTATTTGGAGCCACGTTTATTTCATCAGTTTCTACCTAATAACCGTTTTGCTGCTCTTGAATTTGGTTGTAGCTTTTGTCTTGGAGGCTTTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGCGAAGAACAGGAACAGGATGCAGATAGTAGAAAGGATCGTCGACGTTTCGTCGGCACAAAAACTAGCAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGATGTAAAGGATTCCGATTAG 2217 39.83 MDESLLGVESSSSSSSRRQIPHVKFKRRSDAIAYGSAYQRAAALVDLAEDGVGIPEKILDQSNFQSAAKLYFIFIKFDLIWSVNFFALVVLNFFEKPLWCSKYDTHSCNDREYFFLGQLPYLTAVEFLIYEAVTLIILMIHTFFPISFEGAQLYWKNPLNQLKVICLIILVADFLIYTLYLSPVAFDYLPFRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALWFLFLLFSSWLAYVIFEDTQQGKLLFTSFGATLYQMFILFTTSNNPNVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTDNVGFINKQQCLILLEELNRYRTLPKISRDDYELIFDELDDSRDFKINMNEFADLCNAIALKFQKEDIPSVFEAYPSIYNSVSSKKLKAFVRSPSFGYAISFILILNLVAVIIETTLDIENNVGQKAWQELEFVFGWIYVVEMALKIYAFGFMNYWRDGQNQFDFLVTWIIVIGETMTFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGLVNAGNPALSKTDLDDDDYLLFNFNDYPNGMVTLFNLLVMGNWQDWMQSYKELTGSIWSHVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQEQDADSRKDRRRFVGTKTSSRKVDILLHHMLSAELDVKDSD 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12457265 12471694 + Carg19123-RA Car11g01567 157520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01567 738 MobiDBLite consensus disorder prediction 1 19 - -
Car11g01567 738 Pfam Ion transport protein 134 318 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car11g01567 738 Pfam Ion transport protein 437 682 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car11g01567 738 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509
Car11g01567 738 MobiDBLite consensus disorder prediction 1 21 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01567 Car19g00780 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01567 Car-Chr11:12457265 Car19g00780 Car-Chr19:8494629 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01567 K16900 - csv:101206980 1300.42