Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01570 ATGTCTTGTTCTTCAATCACTCTGTTCTGCGCCGTAATTTCGATTCTAATCTCCATTTCCATCTCAGTCGCCGCTACAGAGTTCATCTTCAACACGAATTTCACTTCCACTAATACTCTGCTCTTCGGCAACGCCACCGTTGATTCATCTGTTCTTATTCTCACAAGGGATTCAACTTTCACCATCGGCCGTGCTCTATACCCTTCCAAAATCCCGATCCGTTTCTCCGATTCTTCTTTTTCCTTTGCAACTTCCTTCATCTTCTCCGTCACTCCACAGCCAAATCATCTCCCCGGCCATGGATTCGCCTTTCTCTTCACACCTTCTACTGGAATCAATGGCACGAGCTCGGCTCAGAATTTGGGGCTTTTCAATTTCACCACTAATGGTAACCCTAATAACCATGTCTTCGCTGTTGAGTTCGATTCCTTCCAAAATCAAGAGTTCAACGACTCGAATGATAACCATGTGGGTGTAGATTTGAATTCTCTTGAGTCTACTGCCTCATCTACAGCAGGGTTTTGGAATGAACATGGAGAATTCAAGGAGTTGAGGATCAACAATGGAGAAATTTATCAGGTTTGGATTGAATGCTTAAACTCTTTGGTTAATATTACAATGGCTGAATTGGGAATGAGAAAGCCTAGAAAACCATTGATATCTCTGTCTGTGAGTTTCTCTGAATTGCTTTTGGATGAGATGTTTGTAGGATTTACAGCCTCCACAGGGCAATTAGTTCAAAGCCACAAGATATTATCATGGAGTTTTAGTACCTCTAATTTGTCAATTGGTGATGCTTTAGTAAGAACGAATTTGCCATCATTTGCTTCTCATAATGACTCTATTTTTAACTCAATAGCTTTCATTGTGGGGATAATTGTGGGTGGTTCTGGGCTTGTGATCATCTGTTGTATTGTGGTCTATGTTCTTGTAAGTATCAAAAGAAGGGGAACAAAGAAACCAATGGATGATGATATTGAAGATTGGGAGTTGGAATATTGGCCACATCGGTTTGCTTATGATGATGTTTATGCAGCAACTGATGGGTTCTCAGAGGCCAATGTTGTTGGCTTTGGGCGTAATGGAATGGTCTATAAAGGGGAATTAGGGAGATCAAAGGTTGCTGTGAAGAAAATCTCTGTTGAATCTGAGTGTGGAATGAGGGAGTTTATGGCCGAGATTTCGAGTCTCAGACGATTAAAACATAGAAATTTAGTGAAACTTATAGGATGGTGCAAGAAAGAGAAGGGAAGCTTGATCTTAATGTATGAATTCATGGAAAATGGAAGTTTAGACAAGAAGTTGTTCGAGTGTGATGAGAATACGACGCTGAGTTGGGAGAAAAGGATGAAGGTTTTGAGCGATGTAGCGACGGGGCTGCTATATCTGCATCAAGGTTGGGATTACAAGGTTATACATAGTGACGTTAAAGCAAACAACGTGCTACTCGACAAGGACATGAACGCAAGGTTAGGAGACTTCGGGTTGGCTCGAATGCAACCCAACAAGAGAACGGTAGACAAAAAGCGAGTGGTGGGAACTGTTGGGTACTTGGCGCCGGAGGTAGTTCGAACAGGGCGAGTATCGATGCAAGGCGACGTTTTCGGGTTCGGTGTGTTGGTTTTGGAGGTGGTTTGTGGGCGGAGAGCGATGGAAGAAGGGAAGCCATTGTTGGTAGATTGGATGAGAGGAGTAATGGAGAGGAATGAGATTGTAGTGGCTGTTGATGAGAGATTGAAAGTTGAAGAGGTTGGAGAAGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGATTATTATGTGCACATCCTGAGGCTGGTGCAAGGCCAACAATGCAACAAGTTATGAACATTTTGGGTGAGATAAACAAAGATAACTCAAATCATCGAACGTCTGAACAAATCAAAACATCTTCTTCTTCAACATCCTTCGTTGAATCAGACGTTTTAAAGAGTGGTCGCTAG 1965 42.29 MSCSSITLFCAVISILISISISVAATEFIFNTNFTSTNTLLFGNATVDSSVLILTRDSTFTIGRALYPSKIPIRFSDSSFSFATSFIFSVTPQPNHLPGHGFAFLFTPSTGINGTSSAQNLGLFNFTTNGNPNNHVFAVEFDSFQNQEFNDSNDNHVGVDLNSLESTASSTAGFWNEHGEFKELRINNGEIYQVWIECLNSLVNITMAELGMRKPRKPLISLSVSFSELLLDEMFVGFTASTGQLVQSHKILSWSFSTSNLSIGDALVRTNLPSFASHNDSIFNSIAFIVGIIVGGSGLVIICCIVVYVLVSIKRRGTKKPMDDDIEDWELEYWPHRFAYDDVYAATDGFSEANVVGFGRNGMVYKGELGRSKVAVKKISVESECGMREFMAEISSLRRLKHRNLVKLIGWCKKEKGSLILMYEFMENGSLDKKLFECDENTTLSWEKRMKVLSDVATGLLYLHQGWDYKVIHSDVKANNVLLDKDMNARLGDFGLARMQPNKRTVDKKRVVGTVGYLAPEVVRTGRVSMQGDVFGFGVLVLEVVCGRRAMEEGKPLLVDWMRGVMERNEIVVAVDERLKVEEVGEEIDEMERMVCLGLLCAHPEAGARPTMQQVMNILGEINKDNSNHRTSEQIKTSSSSTSFVESDVLKSGR 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12476942 12478906 + Carg19126-RA Car11g01570 157523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01570 654 Pfam Legume lectin domain 26 260 IPR001220 GO:0030246
Car11g01570 654 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Car11g01570 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Car11g01570 654 Pfam Protein kinase domain 351 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01570 654 MobiDBLite consensus disorder prediction 623 654 - -
Car11g01570 654 Coils Coil 574 594 - -
Car11g01570 654 ProSiteProfiles Protein kinase domain profile. 350 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01570 654 MobiDBLite consensus disorder prediction 632 654 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00082 Car11g01570 CCT
Car11g01570 Car20g00175 CCT
Car02g00082 Car11g01570 ECH
Car11g01570 Car20g00175 ECH
Car11g01570 Car19g00784 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01570 Car-Chr11:12476942 Car14g00102 Car-Chr14:521162 1.37E-152 dispersed
Car11g01570 Car-Chr11:12476942 Car13g00526 Car-Chr13:7275249 0 wgd
Car11g01570 Car-Chr11:12476942 Car18g00348 Car-Chr18:2145325 0 wgd
Car11g01570 Car-Chr11:12476942 Car19g00784 Car-Chr19:8513560 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89205 PF00069 Pkinase 2.60E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01570 - - csv:101216388 966.066