Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01576 ATGGCTTCATCCAGAGAGCGCGAGAACTTCGTTTACATCGCCAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTGGAGGAAAGAAATTTACTCTCTGTTGGGTACAAGAATGTGGTTGGTGCAAGGAGAGCTTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAACAAATGCCAAACGCATCAAGGAGTACAGACAAAAGGTTGAAACAGAGCTCTCTGGTATTTGTACTGATATCATGACAGTGATTGACGAACACCTAATTCCCTCTGCTTCAGCTGGGGAATCAACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACTAGCTCAGCCGAATCTGAATTGCCTCCTACACATCCTATCCGCTTGGGTTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATCCTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGGAGCCATCTCCGAACTTGACACCCTCAATGAGGAGTCTTACAAAGATAGCACCTTAATCATGCAGCTTCTTAGAGACAACCTCACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGGTCAACGGCACCGTCAAAGTTGCCGGTGGCGACGATGAGTGA 783 43.93 MASSRERENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVETELSGICTDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDGAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKVNGTVKVAGGDDE 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12512982 12516032 - Carg19132-RA Car11g01576 157529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01576 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Car11g01576 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Car11g01576 260 Coils Coil 13 33 - -
Car11g01576 260 Gene3D - 1 250 IPR036815 -
Car11g01576 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Car11g01576 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Car11g01576 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Car11g01576 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Car11g01576 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Car11g01576 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Car11g01576 260 PIRSF 14-3-3 1 247 IPR000308 -
Car11g01576 260 Pfam 14-3-3 protein 14 235 IPR023410 -
Car11g01576 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Car11g01576 260 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 246 - -
Car11g01576 260 SMART 1433_4 7 248 IPR023410 -
Car11g01576 260 PANTHER 14-3-3 PROTEIN 3 246 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01734 Car-Chr4:9931031 Car11g01576 Car-Chr11:12512982 5.92E-116 dispersed
Car05g00393 Car-Chr5:2246184 Car11g01576 Car-Chr11:12512982 3.27E-53 dispersed
Car05g00448 Car-Chr5:2561609 Car11g01576 Car-Chr11:12512982 5.97E-150 dispersed
Car11g01576 Car-Chr11:12512982 Car12g00098 Car-Chr12:528217 5.53E-146 dispersed
Car12g00168 Car-Chr12:1031087 Car11g01576 Car-Chr11:12512982 4.44E-111 dispersed
Car11g01576 Car-Chr11:12512982 Car19g00808 Car-Chr19:8705985 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01576 K06630 - csv:101208446 486.108