Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01576 | ATGGCTTCATCCAGAGAGCGCGAGAACTTCGTTTACATCGCCAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTGGAGGAAAGAAATTTACTCTCTGTTGGGTACAAGAATGTGGTTGGTGCAAGGAGAGCTTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAACAAATGCCAAACGCATCAAGGAGTACAGACAAAAGGTTGAAACAGAGCTCTCTGGTATTTGTACTGATATCATGACAGTGATTGACGAACACCTAATTCCCTCTGCTTCAGCTGGGGAATCAACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACTAGCTCAGCCGAATCTGAATTGCCTCCTACACATCCTATCCGCTTGGGTTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATCCTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGGAGCCATCTCCGAACTTGACACCCTCAATGAGGAGTCTTACAAAGATAGCACCTTAATCATGCAGCTTCTTAGAGACAACCTCACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGGTCAACGGCACCGTCAAAGTTGCCGGTGGCGACGATGAGTGA | 783 | 43.93 | MASSRERENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVETELSGICTDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDGAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKVNGTVKVAGGDDE | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12512982 | 12516032 | - | Carg19132-RA | Car11g01576 | 157529 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01576 | 260 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - | |
Car11g01576 | 260 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
Car11g01576 | 260 | Coils | Coil | 13 | 33 | - | - | |
Car11g01576 | 260 | Gene3D | - | 1 | 250 | IPR036815 | - | |
Car11g01576 | 260 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
Car11g01576 | 260 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
Car11g01576 | 260 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
Car11g01576 | 260 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
Car11g01576 | 260 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - | |
Car11g01576 | 260 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
Car11g01576 | 260 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - | |
Car11g01576 | 260 | Pfam | 14-3-3 protein | 14 | 235 | IPR023410 | - | |
Car11g01576 | 260 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
Car11g01576 | 260 | PANTHER | 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED | 3 | 246 | - | - | |
Car11g01576 | 260 | SMART | 1433_4 | 7 | 248 | IPR023410 | - | |
Car11g01576 | 260 | PANTHER | 14-3-3 PROTEIN | 3 | 246 | IPR000308 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01734 | Car-Chr4:9931031 | Car11g01576 | Car-Chr11:12512982 | 5.92E-116 | dispersed | |
Car05g00393 | Car-Chr5:2246184 | Car11g01576 | Car-Chr11:12512982 | 3.27E-53 | dispersed | |
Car05g00448 | Car-Chr5:2561609 | Car11g01576 | Car-Chr11:12512982 | 5.97E-150 | dispersed | |
Car11g01576 | Car-Chr11:12512982 | Car12g00098 | Car-Chr12:528217 | 5.53E-146 | dispersed | |
Car12g00168 | Car-Chr12:1031087 | Car11g01576 | Car-Chr11:12512982 | 4.44E-111 | dispersed | |
Car11g01576 | Car-Chr11:12512982 | Car19g00808 | Car-Chr19:8705985 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01576 | K06630 | - | csv:101208446 | 486.108 |