Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01583 | ATGGAAGTCGACAATGAGTACCGAAGAAAAGAGCAACTCGTTCTTGTGGCAATTGTTGTACTCGCTTCCCTGGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAAATCCGCAAAAGGGATGATCTTGAGAAGGGAGGTAGTTTTGACAATGTTAAAGAATTTTCCACCGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTATACTCAGCTACCTGTGGCTTTAGCAAGTCAAACGTGGTCGGGCACGGTAGCTTTGGATATGTATACCGAGGAGTTCTCAACGATGGGAGAAAGGTTGCGATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGACTTCATTCGCCATATTTGTTGGCCTTGCTCGGGTATTGCTCTAATAGCAATCATAAATTGCTCGTTTACGAGTTCATGGCTAATGGCGGTCTGCAAGAACATCTGTATCCTGTTAGCAGTTCAAATTCAGTCAGCGTTAAGTTGGACTGGGAAACGCGGTTGCGAGTTGCGCTTGAAGCTGCCAAGGGTTTGGAGTATTTACATGAACATGTAAGCCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTTCTGTTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATCGGTTCAGACAAAGTCGGGGGACACGTATCCACTCGAGTACTGGGGACACAAGGATATGTTGCGCCTGAGTATGCGCTAACAGGGCATTTGACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCGGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAATACTCCATGAAGGATGTTGTTCAAGTTGCAGCCATAGCCGCAATGTGTGTTCAACCAGAGGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGACAGCTTCAAAGATCGGTAGCGGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAAGGCTAGTTCGGAAGACTGA | 1200 | 47.08 | MEVDNEYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRDDLEKGGSFDNVKEFSTEKGLQVFTFKQLYSATCGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSNSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTASKIGSGSSSSATKSPVAHDKASSED | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12563543 | 12566740 | + | Carg19139-RA | Car11g01583 | 157536 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01583 | 399 | MobiDBLite | consensus disorder prediction | 375 | 399 | - | - | |
Car11g01583 | 399 | MobiDBLite | consensus disorder prediction | 375 | 391 | - | - | |
Car11g01583 | 399 | Pfam | Protein tyrosine and serine/threonine kinase | 91 | 364 | IPR001245 | GO:0004672|GO:0006468 | |
Car11g01583 | 399 | ProSitePatterns | Protein kinases ATP-binding region signature. | 94 | 116 | IPR017441 | GO:0005524 | |
Car11g01583 | 399 | ProSiteProfiles | Protein kinase domain profile. | 88 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g01583 | 399 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 213 | 225 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car08g00508 | Car-Chr8:3219050 | Car11g01583 | Car-Chr11:12563543 | 9.93E-86 | dispersed | |
Car11g01583 | Car-Chr11:12563543 | Car14g00853 | Car-Chr14:5024085 | 8.28E-106 | dispersed | |
Car12g00337 | Car-Chr12:2131129 | Car11g01583 | Car-Chr11:12563543 | 1.74E-90 | dispersed | |
Car14g01313 | Car-Chr14:11132889 | Car11g01583 | Car-Chr11:12563543 | 2.19E-74 | dispersed | |
Car17g00832 | Car-Chr17:7085636 | Car11g01583 | Car-Chr11:12563543 | 7.74E-90 | dispersed | |
Car01g01165 | Car-Chr1:10799747 | Car11g01583 | Car-Chr11:12563543 | 1.22E-122 | transposed | |
Car10g00931 | Car-Chr10:7245935 | Car11g01583 | Car-Chr11:12563543 | 4.27E-119 | transposed | |
Car11g01583 | Car-Chr11:12563543 | Car19g00800 | Car-Chr19:8656218 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89206 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-44 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01583 | - | - | csv:101204636 | 706.442 |