Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01583 ATGGAAGTCGACAATGAGTACCGAAGAAAAGAGCAACTCGTTCTTGTGGCAATTGTTGTACTCGCTTCCCTGGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAAATCCGCAAAAGGGATGATCTTGAGAAGGGAGGTAGTTTTGACAATGTTAAAGAATTTTCCACCGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTATACTCAGCTACCTGTGGCTTTAGCAAGTCAAACGTGGTCGGGCACGGTAGCTTTGGATATGTATACCGAGGAGTTCTCAACGATGGGAGAAAGGTTGCGATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGACTTCATTCGCCATATTTGTTGGCCTTGCTCGGGTATTGCTCTAATAGCAATCATAAATTGCTCGTTTACGAGTTCATGGCTAATGGCGGTCTGCAAGAACATCTGTATCCTGTTAGCAGTTCAAATTCAGTCAGCGTTAAGTTGGACTGGGAAACGCGGTTGCGAGTTGCGCTTGAAGCTGCCAAGGGTTTGGAGTATTTACATGAACATGTAAGCCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTTCTGTTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATCGGTTCAGACAAAGTCGGGGGACACGTATCCACTCGAGTACTGGGGACACAAGGATATGTTGCGCCTGAGTATGCGCTAACAGGGCATTTGACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCGGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAATACTCCATGAAGGATGTTGTTCAAGTTGCAGCCATAGCCGCAATGTGTGTTCAACCAGAGGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGACAGCTTCAAAGATCGGTAGCGGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAAGGCTAGTTCGGAAGACTGA 1200 47.08 MEVDNEYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRDDLEKGGSFDNVKEFSTEKGLQVFTFKQLYSATCGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSNSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTASKIGSGSSSSATKSPVAHDKASSED 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12563543 12566740 + Carg19139-RA Car11g01583 157536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01583 399 MobiDBLite consensus disorder prediction 375 399 - -
Car11g01583 399 MobiDBLite consensus disorder prediction 375 391 - -
Car11g01583 399 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Car11g01583 399 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Car11g01583 399 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01583 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00508 Car-Chr8:3219050 Car11g01583 Car-Chr11:12563543 9.93E-86 dispersed
Car11g01583 Car-Chr11:12563543 Car14g00853 Car-Chr14:5024085 8.28E-106 dispersed
Car12g00337 Car-Chr12:2131129 Car11g01583 Car-Chr11:12563543 1.74E-90 dispersed
Car14g01313 Car-Chr14:11132889 Car11g01583 Car-Chr11:12563543 2.19E-74 dispersed
Car17g00832 Car-Chr17:7085636 Car11g01583 Car-Chr11:12563543 7.74E-90 dispersed
Car01g01165 Car-Chr1:10799747 Car11g01583 Car-Chr11:12563543 1.22E-122 transposed
Car10g00931 Car-Chr10:7245935 Car11g01583 Car-Chr11:12563543 4.27E-119 transposed
Car11g01583 Car-Chr11:12563543 Car19g00800 Car-Chr19:8656218 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89206 PF07714 PK_Tyr_Ser-Thr 3.00E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01583 - - csv:101204636 706.442