Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g01584 | ATGGCGTCCATTTCCCATCTTTTCATTGTTCTTTCCCTTTTAGCCTTCTCAGCCAATGCTCAGCTCTCAGCCAACTTTTACGCGAAAAGCTGTCCCAATCTCGAACGAACCGTTCGTTCCGTTATGACCAAAGCTGTTATCGCAGAAAAACGTATGGGAGCTTCAATTCTTCGCCTGTTCTTCCACGACTGCTTTGTTAATGGTTGTGATGGTAGTATATTGCTCGATGATACACCGACATTTACGGGCGAAAAGAATGCATTTCCTAATCGAGATACAGCTAGAGGGTTTGAAGTGATTGACAAAATTAAAACCGAAGTCGAAGCTAGTTGCAAGAACACCGTTTCTTGTGCTGATATTCTTGCTCTTGCCGCTCGAGATGGGGTTGATTTGCTTGGAGGTCCTGATTGGAATGTACTACTCGGTCGGAAGGATTCGAGGACGGCGAGCGAGAGTGACGCTAACAACAACCTCCCGGGGCCAGGCTCCGACCTCCCGACGCTCATCTCTATGTTCAATGCCAAAGGCTTCAACGCCAATGAGATGACTGCCCTCTCCGGCGCCCACACTATTGGTATGGCTAGTTGTCGATTCTTCCGAAGACGCATTTACAACGATACCAACATCGATCCCGCCTTCGCCGAACAGCGGAGAGACAACTGTCCGTTCACAGGCGGCGACGCGAACTTGGCCCCTCTCGACTCGACCACCCAGAGGTTCGACAACCAATATTTCAAAGACTTGATTGAACAGCGCGGACTGTTACATTCGGACCAAGAGCTCTTCAACGGCGGCTCACAAGACGCCTTGGTTCAGACTTACAGTAAAAGTCTCCTAACCTTTAGAAGGGATTTCGTTTACGCAATGATTAAGATGGGGGACCTCAGTCCTCCACCTGGATTACCCACTGAGATTAGACGAAATTGCAGGGTAGTTAATTAA | 942 | 48.73 | MASISHLFIVLSLLAFSANAQLSANFYAKSCPNLERTVRSVMTKAVIAEKRMGASILRLFFHDCFVNGCDGSILLDDTPTFTGEKNAFPNRDTARGFEVIDKIKTEVEASCKNTVSCADILALAARDGVDLLGGPDWNVLLGRKDSRTASESDANNNLPGPGSDLPTLISMFNAKGFNANEMTALSGAHTIGMASCRFFRRRIYNDTNIDPAFAEQRRDNCPFTGGDANLAPLDSTTQRFDNQYFKDLIEQRGLLHSDQELFNGGSQDALVQTYSKSLLTFRRDFVYAMIKMGDLSPPPGLPTEIRRNCRVVN | 313 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 12568065 | 12569282 | + | Carg19140-RA | Car11g01584 | 157537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g01584 | 313 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
| Car11g01584 | 313 | Pfam | Peroxidase | 38 | 277 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car11g01584 | 313 | ProSiteProfiles | Plant heme peroxidase family profile. | 21 | 313 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car11g01584 | 313 | ProSitePatterns | Peroxidases active site signature. | 53 | 64 | IPR019794 | GO:0004601 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car10g00921 | Car-Chr10:6989501 | Car11g01584 | Car-Chr11:12568065 | 2.23E-120 | dispersed | |
| Car11g01584 | Car-Chr11:12568065 | Car16g00669 | Car-Chr16:4236763 | 7.92E-99 | dispersed | |
| Car20g00279 | Car-Chr20:1609496 | Car11g01584 | Car-Chr11:12568065 | 6.48E-58 | dispersed | |
| Car11g01584 | Car-Chr11:12568065 | Car19g00799 | Car-Chr19:8649139 | 1.34E-177 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g01584 | K00430 | - | csv:101208932 | 474.937 |