Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01597 ATGATACCCATTTCAATTAAGGTGTCACTGGATCTTGTAAAGAGCTTATATGCGAAATTCATTGATTGGGACTATGAAATGATTGACCGTGTGACTGGTATTCCTTCCCATGCTACGAATACGGCAATAAGTGAGGACCTGGGACAAGTTGAATACATTTTGACGGATAAAACCGGTACCCTCACTGAAAACAAGATGATCTTCAGGAGATGTTGTATCAGTGGCATATTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAGTTGCTCAATGCTATTGCAAGCAGCTCTCCTGACGTTACAAGATTTCTAACAATTATGTCAATTTGTAATACAGTGGTGCCTACAAAAAGCAAAAGTGGAAATATCCTGTACAAGGCACAGTCACAGGATGAGGATGCTCTCGTGAATGCTGCTGCTTACTTGCATATGGTATTTGTCAATAAGAATGCTAATAATCTTGACATTCAGTTTCATGGAATGCTAAATAGATATGAACTCCTAGATACTCTGGAGTTCACATCTGAACGAAAAAGGATGTCTGTGGTAGTTAAAGATTGTCAGAATGGGAAGATTATCCTCCTATCAAAAGGAGCTGATGAAGCTATACTTCCTCATGCTTATGCTGGCCAACAAACAAGAACATTTATTGAAGCTGTTGACCAGTACGCACAACTGGGGCTCCGTACATTATGTCTGGCTTGGCGGGAACTAGAAGAAGATGAGTATCGAGAATGGGCTTTTATGTTTAAGGAGGCTAATAGCACATTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGCCAAAGATTAGAGCGCAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATCGAAACATTAAGAAGAGCAGGAATAAATTTCTGGATGCTGACGGGAGACAAGCAGAACACTGCCATTCAGATAGCTCTCCTATGCAACTTTATTTCACCAGAGCCCAAAGGACAATTATTGTTAATTGATGGAAAAACGGAGGATGAAGTTTGTAGAAGTTTGGATAGAGTTGTTCTGACTATGAAGACCACAACCTCAGAACCCAAGGATGTTGCTTTCGTTGTTGATGGCTGGGCTCTTGAAATTGCTCTCAAGAATTATCGCAGGGCTTTCACCGAATTAGCAATCCTATCAAGAACTGCAATATGTTGTCGTGTTACTCCATCACAGAAGGCTCAGCTAGTGGAACTCTTAAAATCGTGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGACATTGGAGTGGGCATTAGTGGAAGAGAAGGACTGCAAGCAGCTAGGGCAGCTGATTACAGTATTGGAAAGTTCAGGTTTCTGAAAAGATTGATTTTAGTTCATGGACGATACTCATACAACCGTACAGCATTTTTGTCACAATATTCATTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATTTCAGGTGTCTCTGGGACCAGTCTATTTAATTCTGTAAGCTTGATGGCTTACAATGTTTTCTACACCAGTATTCCTGTATTAGTTAGTGTCCTTGACAAAGATCTCAGCGAAGAAACAGTGATGCAACATCCTCAAATTTTATTTTACTGCCAAGCTGGGAGGCTTTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCCGTTGTGGTGTTTGTAATTAGCATCCATGCCTATGCTAACGAAAAGAGTGAAATGGTGGAGGTTTCAATGGTGGCTCTATCTGGGTGCATTTGGTTACAGGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATGTTGCAACATCTGGCTATATGGGGGAATTTAGCTGCTTTCTACGTGATCAATTGGATCTTCAGTGCCATTCCTTCATCTGGAATGTATACAATAATGTTTCGATTATGTGGACAACCATCTTACTGGATAACCATATTTCTAATAGTAGGCGTGGGAATGGGCCCACTTCTAGCTATCAAGTACTTCAGGTACACATATAGGCCAAGCAAAATCAACACTCTTCAGCAGGCTGAACGATTGGGTGGGCCGATCATGTCGCTCAAAAACATAGAGCACCAGCCTCGGCCCATTGAGAAAGAAGTGTCTCCACTGTCAATAACTCAGCAGCCCAAGAGCAGAAATACAGTCTACGAACCTCTTTTATCAGACTCTCCTACTGCCACTAGAAGATCTCTTGCGTCAGGTCCCTCCTTCGATTTCTTTCAGGCACCACCCAGTTATTCAAGAAATAAGGATAACTGA 2331 41.1 MIPISIKVSLDLVKSLYAKFIDWDYEMIDRVTGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDKKLLNAIASSSPDVTRFLTIMSICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKNANNLDIQFHGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIILLSKGADEAILPHAYAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLDRVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPIMSLKNIEHQPRPIEKEVSPLSITQQPKSRNTVYEPLLSDSPTATRRSLASGPSFDFFQAPPSYSRNKDN 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12626969 12638492 + Carg19153-RA Car11g01597 157550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01597 776 Pfam Cation transport ATPase (P-type) 111 208 - -
Car11g01597 776 MobiDBLite consensus disorder prediction 725 776 - -
Car11g01597 776 ProSitePatterns E1-E2 ATPases phosphorylation site. 56 62 IPR018303 -
Car11g01597 776 Pfam Phospholipid-translocating P-type ATPase C-terminal 453 692 IPR032630 -
Car11g01597 776 MobiDBLite consensus disorder prediction 721 776 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01597 Car-Chr11:12626969 Car07g01175 Car-Chr7:7105232 5.36E-128 dispersed
Car11g01597 Car-Chr11:12626969 Car19g00788 Car-Chr19:8552621 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01597 K01530 - csv:101210900 1460.28