Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01601 ATGACCACCGGAAGAGAAATTCTCCACAAAATGAAGGTGAAGGCAGGGTTTTGTTCTTCGGCGCCGGATACTGCTGCCAAAGGGAAGGCCAAAGCGACCAAGAATCATGTAAGCCATGGCAGCCATTTGGTTAAGGGCAAGACCAACCACCCCATGGAAGATTACTTGGTCACTGATTTCAAGCGCGTCAAGGACCACGACTTGGGTTTGTTTGCCATTTTCGACGGCCATTTGGGCCATGATGTTGCCAATTTCTTGCAGAATAATCTCTTTGATAATATCCTCAAACAGGCTGATTTCTGGAGCGAAACGAGAAAGGCCATAAAAAGAGCGTACAAGAAAACCGACGATGAAATATTGGATAAAGTAAAGCAGCTGGGGAGAGGAGGATCAACGGCGGTAACCGCCATATTGATCGACGGCCACAAACTCATCGTTGCCAACGTCGGAGATTCCAGAGCCGTTCTTTGCAAAAACGGCGTCGCTGAGCAGCTCTCCGTTGACCACGAACCCAGTAAAGAAAAAAGGGATATTGAAAGCCGTGGAGGCTTCGTATCAAATCTTCCAGGCGATGTGCCACGTGTCGACGGACAATTGGCTGTTGCGAGAGCATTTGGTGATAAGAGCTTGAAACTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGATGAATCTACAGAGTTCATGATTTTGGCTAGCGATGGCATTTGGAAGGTAATGACAAACAAAGAGGCGGTGGAATCTATTAGACACATAAAGGATGCGAACGTGGCAGCCAAACGACTTATCGATGAAGCAGTATCCAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCGGTGA 861 47.5 MTTGREILHKMKVKAGFCSSAPDTAAKGKAKATKNHVSHGSHLVKGKTNHPMEDYLVTDFKRVKDHDLGLFAIFDGHLGHDVANFLQNNLFDNILKQADFWSETRKAIKRAYKKTDDEILDKVKQLGRGGSTAVTAILIDGHKLIVANVGDSRAVLCKNGVAEQLSVDHEPSKEKRDIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVKTVDESTEFMILASDGIWKVMTNKEAVESIRHIKDANVAAKRLIDEAVSRKSKDDISCIVVRFR 286
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 12750873 12752336 - Carg04624-RA Car11g01601 157554
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car11g01601 286 Pfam Protein phosphatase 2C 49 278 IPR001932 -
Car11g01601 286 PANTHER PROTEIN PHOSPHATASE 2C 3 285 IPR015655 GO:0004722|GO:0006470
Car11g01601 286 CDD PP2Cc 37 285 IPR001932 -
Car11g01601 286 SMART PP2C_4 34 283 IPR001932 -
Car11g01601 286 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 3 285 - -
Car11g01601 286 SUPERFAMILY PP2C-like 34 285 IPR036457 -
Car11g01601 286 Gene3D - 14 286 IPR036457 -
Car11g01601 286 ProSiteProfiles PPM-type phosphatase domain profile. 38 285 IPR001932 -
Car11g01601 286 SMART PP2C_SIG_2 43 285 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00949 Car-Chr8:6345620 Car11g01601 Car-Chr11:12750873 4.56E-38 dispersed
Car09g00767 Car-Chr9:4525188 Car11g01601 Car-Chr11:12750873 1.71E-134 dispersed
Car11g01047 Car-Chr11:7986940 Car11g01601 Car-Chr11:12750873 1.73E-28 dispersed
Car11g01601 Car-Chr11:12750873 Car16g00219 Car-Chr16:1235974 1.28E-109 dispersed
Car17g00137 Car-Chr17:835270 Car11g01601 Car-Chr11:12750873 1.13E-36 dispersed
Car11g01599 Car-Chr11:12642670 Car11g01601 Car-Chr11:12750873 2.12E-21 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01601 K17506 - csv:101211399 503.056