Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01624 ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGAGTTTGTGGCCACTATCACAAATACGAAGAAGGGGAAGTCTGTGGGATATGTGGTCATCGTGTTCCCGCTACATCCGAGAAAACTTCCTTGCAAGTTAGTGCGTTTCCTTCAGAGATCTTGCCAGAGTTTCTCTATTTGGGAAGTTATGACAACGCTTCACGGTCTGAACTTTTGAAGACTCAAGGAATTTCTCGCGTTCTTAACACTGTGCCTGCTTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATACGACAAGACGTTACCATTTGATGACGCTGTTGAATTTCTAGATCAATGTGAACGTGATAAGGCTCGTGTTTTGGTGCACTGCATGTCGGGAAAAAACAGGTCTCCAGCTATTGTAATCGCGTTCTTGATGAAATGCAAAGGATGGAGACTTGCTCAGAGTTACCAGTGGGTGAAAGAGCGGAGGCCATCCGTTGACTTAACTGAGCCTATCTATCAGCAGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCAGCAGAAAACGCCCTCCCAACCTTACCAATCTTCCCTCCTGTTGGTCTGCCTTCTTTTAGCTTCGGCTTCCCAAAGACCTGCGACCCAGTTCCCACAACTCCATTCAACACCATTGGTGCAACATCTATCTTCTCCGCCCCCAACATAGACTTACCTTCTCACGAGTTCACGTTCGGCGCTGGCCAGAGTCAAACCAGTTTCTCTGCAAGCCCCTTCGGCGCAAATCCAAGAAACTCAACCAGCAGCAACATCCAAATGGACAGTGCTTAA 819 47.13 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPACQNLYKNSFTYHCLQYDKTLPFDDAVEFLDQCERDKARVLVHCMSGKNRSPAIVIAFLMKCKGWRLAQSYQWVKERRPSVDLTEPIYQQLQEYEQKVFGSAENALPTLPIFPPVGLPSFSFGFPKTCDPVPTTPFNTIGATSIFSAPNIDLPSHEFTFGAGQSQTSFSASPFGANPRNSTSSNIQMDSA 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12864460 12867784 - Carg04647-RA Car11g01624 157577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01624 272 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Car11g01624 272 Pfam Dual specificity phosphatase, catalytic domain 55 179 IPR000340 GO:0008138|GO:0016311
Car11g01624 272 MobiDBLite consensus disorder prediction 250 272 - -
Car11g01624 272 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Car11g01624 272 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01624 Car-Chr11:12864460 Car18g00686 Car-Chr18:8145204 6.16E-12 dispersed
Car11g01624 Car-Chr11:12864460 Car19g00829 Car-Chr19:8814792 2.71E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01624 K04459 - csv:101211000 522.316