Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01641 ATGGCAAATCCGGCGAAGAAGCACGTCTTTCTCTTCTACTGCGCGGAATGCGAAGAACTTGCCCACAAAGTTGCTGCTCAATCCGATTCCATCACTCTTCAAACCATCAAATGGAGGACGTTTGATGATGGTTTTCCAAATATTTATATAAACAATGCTCAAGATCTACGCGGGAATCATGTAGCATTCCTTGCATCTTTCAGCCACCCAGGAGCCATCTTTGAACAGATATCAGTCATATACAATCTCCCCAGGCTTTTTTCTGCTTCATTCACCTTGGTATTGCCCTTCTTTCCTACTGGCTCCTTTGAGCGAATGGAAGAAGAAGGGGATGTTGCAACAGCATTTACCATGGCCCGGATCTTATCAAATATCCCTATTTCAAGAGGTGGCCCAACAAGCGTAGTTATCTATGATATTCATGCCTTGCAGGAAAGGTTTTACTTTGGGGATAATGTTTTGCCTTTGTTTGAAACTGGAATTCCACTCCTGAAGCAACGTCTGCGCCAACTTCCTGATGCTGACAATGTAGTTATAGCATTTCCAGATGATGGAGCTTGGAAACGATTCCACAAGCAACTCGATGGCTATCCTGTGGTCATCTGTACAAAAGTTCGGGAAGAAGACAAAAGGATAGTGCGGATCAAGGAAGGAGTCCCTGCTGGTTGTCACGTTGTTATCGTTGATGATTTGGTACAATCTGGAGGAACCTTGATTGAGTGCCAGGATAGATCATGGGTTTCTAAGTATGGAACACTACCTCCATTGGGATCTGTGATTCCTAACGCCTACTATTTCATCAAACAAAAAGTTTTAGCAGCTCACGGTGCGGCCAAGGTTAGCGCATATGTTACTCATGGTGTTTTCCCAAAGCAATCATGGAATCGATTCCTTCACAACAATGGTCTGGAGATAGCGTTTTCTCACTTCTGGATCACAGATTCCTGCCCTCACACAGTCAAAGCCATATCTGATAAAGCTCCTTTTGAAGTTCTGAGTCTAGCAGATTCCATTGCTGATGCTTTGATCTCCGATTCCCCTGTTCTCGTCTTTATTACCTGCTTCTTCATCGTTCAGCAGTTGGGTTTAGGGCATTCATCCAGTAGGAATGCTAAAAGTTTCCATACTCGATCTGATTTTGGTTACTTTATGGTAGCCGGTGGTGTTGGTTGTTCTGGGTCGGTGATTGAGTTTCTGGTTCAGGTTTTGGGATTGCAGGTAGGGAAGTGTATGAGGGATTTGATTCGGGTAATTTTATTATGTTCCGTGGAGGATTCGGGAAGGAGCATAAGGAGGGATTGTGGGTTTGTGATCCGGAGCAGGGATTTTGTGTTCGCTGTTCTCGACGAAGTTGGGTTTGAGAGTTTAGGGAAATGCAGACCAATCACCGATTCTGCAGAGTTGGACTTTTTCTCTGAATATGGCGATGCTAACAGATTCAAAATTCAGGAAGTTGTTGGGAAGGGGAGTTATGGAGTGGTTTGTTCAGCTGTCGACACTCTCACTAACGAAAAAGTGGCAATAAAGAAGATAAATGATATTTTTGAACACCTATCAGATGCTGCTCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCCGATATTGTTGAAATCAAACACATTATGCTACCGCCTTCTCGTAGGGGGTTCAAAGATATCTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCTAATGATGATTTAACAACAAAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCACTAAAATATATTCACGCAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATATGTGATTTTGGATTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACCAGATGGTATAGAGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTAACTGGAAAACCAATTTTTCCCGGTAAAAATGTTGTTCATCAGCTCGATTTGATGACAGATCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAGAAGGCTAGAAGGTACTTAGCTAGTATGAGGAAGAAGCAGCCCATTCCGTTTTCACAGAAGTTCCCAAATGCGGATCCTCTAGCCCTGCAATTACTACAACGATTGCTTGCGTTTGATCCAAAGGATCGACCTACTGCAGAAGAGGCATTGGCAGATCCTTACTTTAAAGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGGGAGATACTAGAATACCATCCTCAACTGCTGAAAGACTACTTAAATGGAACTGAGAGAGCAAATTTTCTTTATCCAAGTGCACTCGATCAGTTCAAAAAACAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGCTTATCCTCTAGAAAGAAAGCATGCATCTCTTCCTAGGTCTTCGGTTCAGTCGAATACCATTCCTCCTAAAGCAACATCGAATATTGCTTCTTTTAAAGACCGATATGTGCCACCAGGGGCGTACAGCAACCGGCATTACAGAGATCCAGCTGCACAGAGGATTGCTGCAACTCAAGGTGAGCCTGGAAGAATATCAGGCCCGGTCATGCCATATGATAGTGGAAGTATCGCCAAGGATGCCTATGATCCAAGAAGGTTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCAACATATTATTACCAGCAATCTTGCGGCAAGAGTGAAGAATCATCAACAACAGGGGCTGAGAAAGACACTTCCTTGCAATGCAAACAAGCCCCTCAATGCGGAATGGCAGCCAAATTAACATCCGACACAGCAGCTACTGGTGCTTTCTCAAATCCTTTTTTTATGGCACGTGTAGGATTGCACAAGGCGGGAAACAATGACCGTGCTGCACGTGTGCAGGTAAACGCTCAATATGATACTGGAGCCGTTCCAGCTGCAACTGCCACCACCCATAGAAACACTGGCATGGTCGAGTATGGTATGACAAGAATGTATTAG 3183 43.54 MANPAKKHVFLFYCAECEELAHKVAAQSDSITLQTIKWRTFDDGFPNIYINNAQDLRGNHVAFLASFSHPGAIFEQISVIYNLPRLFSASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPISRGGPTSVVIYDIHALQERFYFGDNVLPLFETGIPLLKQRLRQLPDADNVVIAFPDDGAWKRFHKQLDGYPVVICTKVREEDKRIVRIKEGVPAGCHVVIVDDLVQSGGTLIECQDRSWVSKYGTLPPLGSVIPNAYYFIKQKVLAAHGAAKVSAYVTHGVFPKQSWNRFLHNNGLEIAFSHFWITDSCPHTVKAISDKAPFEVLSLADSIADALISDSPVLVFITCFFIVQQLGLGHSSSRNAKSFHTRSDFGYFMVAGGVGCSGSVIEFLVQVLGLQVGKCMRDLIRVILLCSVEDSGRSIRRDCGFVIRSRDFVFAVLDEVGFESLGKCRPITDSAELDFFSEYGDANRFKIQEVVGKGSYGVVCSAVDTLTNEKVAIKKINDIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTTKHYQFFLYQLLRALKYIHAANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPIFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLASMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERANFLYPSALDQFKKQFAHLEDNGGKSGPAYPLERKHASLPRSSVQSNTIPPKATSNIASFKDRYVPPGAYSNRHYRDPAAQRIAATQGEPGRISGPVMPYDSGSIAKDAYDPRRLIRSALPSHAIHPTYYYQQSCGKSEESSTTGAEKDTSLQCKQAPQCGMAAKLTSDTAATGAFSNPFFMARVGLHKAGNNDRAARVQVNAQYDTGAVPAATATTHRNTGMVEYGMTRMY 1060
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12935511 12944126 - Carg04664-RA Car11g01641 157594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01641 1060 ProSiteProfiles Protein kinase domain profile. 480 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01641 1060 Pfam Protein kinase domain 481 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01641 1060 MobiDBLite consensus disorder prediction 851 888 - -
Car11g01641 1060 MobiDBLite consensus disorder prediction 867 883 - -
Car11g01641 1060 ProSitePatterns MAP kinase signature. 515 618 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car11g01641 1060 ProSitePatterns Protein kinases ATP-binding region signature. 486 510 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00606 Car-Chr4:3477372 Car11g01641 Car-Chr11:12935511 0 dispersed
Car11g01641 Car-Chr11:12935511 Car17g00253 Car-Chr17:1566217 0 dispersed
Car04g01789 Car-Chr4:10223698 Car11g01641 Car-Chr11:12935511 2.73E-161 transposed
Car11g00537 Car-Chr11:2904081 Car11g01641 Car-Chr11:12935511 9.20E-10 transposed
Car19g00849 Car-Chr19:8913493 Car11g01641 Car-Chr11:12935511 4.93E-180 transposed
Car11g01641 Car-Chr11:12935511 Car19g00847 Car-Chr19:8898907 0 wgd
Car11g01641 Car-Chr11:12935511 Car02g00030 Car-Chr2:250886 5.34E-158 wgd
Car11g01641 Car-Chr11:12935511 Car20g00224 Car-Chr20:1293519 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89209 PF00069 Pkinase 6.80E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01641 - - csv:101214068 1080.09