Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01645 | ATGGCGAATGATGAAGGGGAAAGTAAGGAGTACCAGCAGTATGATCCATTTGTTTACAACCAGCTGGATATGAACCGTACCATCCTCCAGCAACAGCCGTCGTTGGATCCTGCTTTCATGAGCTTCACCAACTTCATCGACACGTCGTTAGAGTACAACAGCGTGTGGAGGGCGTTGGACGTGTCCTGCTCTTCATCGGAACTCATTTCTCCGGTGGACGACATGTCCAAAAAGAAGGCTTCAAATGCTTCAGTGTCGTCTTCATCTGATGAGGCTGCACCTGCAGCTGAAGACGATTCCGTGAAGAGCAAGAAAGAAGAGAAGCGTAAGAAACAGAACGCAGCCCAAAAGAAAGAGAAGCGAGAGAGGGAGCCCCGGTTTGCTTTCTTGACCAAGAGCGAGATTGATCAGCTTGAAGATGGATATAGGTGGAGAAAATATGGACAGAAGGCAGTCAAAAACAGTCCTTACCCCAGAAGTTACTACAGATGCACCAGTCAAAAATGCGTAGTGAAGAAACGAGTAGAAAGATCATACCAAGATCCATCCCTGGTCATAACTACGTATGAAGGCCAACACATCCACCATTGCCCGGCTACACTCCGAGGCCATTCGTCTCCGTTTTACGCATCGGCATCGACGTCGACATTGGCAACGGCACCCTCCTCGGGACCACTCTTCTCGCATTTGCTATCAAAGAACTGCCAGACCGATCCCACGTCAATGATGTACCAAAATCTAAATCTCCAGCAACATCTTCAAATGCCTGATCATCATAGTCTGTTGCAGGATTTGTTCACTCAAAAATAG | 810 | 47.78 | MANDEGESKEYQQYDPFVYNQLDMNRTILQQQPSLDPAFMSFTNFIDTSLEYNSVWRALDVSCSSSELISPVDDMSKKKASNASVSSSSDEAAPAAEDDSVKSKKEEKRKKQNAAQKKEKREREPRFAFLTKSEIDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSLVITTYEGQHIHHCPATLRGHSSPFYASASTSTLATAPSSGPLFSHLLSKNCQTDPTSMMYQNLNLQQHLQMPDHHSLLQDLFTQK | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12951829 | 12952818 | + | Carg04668-RA | Car11g01645 | 157598 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01645 | 269 | MobiDBLite | consensus disorder prediction | 95 | 125 | - | - | |
Car11g01645 | 269 | Pfam | WRKY DNA -binding domain | 139 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g01645 | 269 | MobiDBLite | consensus disorder prediction | 73 | 125 | - | - | |
Car11g01645 | 269 | MobiDBLite | consensus disorder prediction | 73 | 93 | - | - | |
Car11g01645 | 269 | ProSiteProfiles | WRKY domain profile. | 133 | 198 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g01645 | 269 | Coils | Coil | 101 | 124 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g01645 | Car-Chr11:12951829 | Car17g00350 | Car-Chr17:2214403 | 3.57E-49 | dispersed | |
Car03g00368 | Car-Chr3:4515984 | Car11g01645 | Car-Chr11:12951829 | 2.07E-22 | transposed | |
Car11g01645 | Car-Chr11:12951829 | Car19g00856 | Car-Chr19:8938314 | 3.32E-134 | wgd | |
Car11g01645 | Car-Chr11:12951829 | Car20g00226 | Car-Chr20:1304429 | 2.90E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4363 | PF03106 | WRKY | 1.30E-24 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01645 | - | - | cmos:111437082 | 484.952 |