Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01645 ATGGCGAATGATGAAGGGGAAAGTAAGGAGTACCAGCAGTATGATCCATTTGTTTACAACCAGCTGGATATGAACCGTACCATCCTCCAGCAACAGCCGTCGTTGGATCCTGCTTTCATGAGCTTCACCAACTTCATCGACACGTCGTTAGAGTACAACAGCGTGTGGAGGGCGTTGGACGTGTCCTGCTCTTCATCGGAACTCATTTCTCCGGTGGACGACATGTCCAAAAAGAAGGCTTCAAATGCTTCAGTGTCGTCTTCATCTGATGAGGCTGCACCTGCAGCTGAAGACGATTCCGTGAAGAGCAAGAAAGAAGAGAAGCGTAAGAAACAGAACGCAGCCCAAAAGAAAGAGAAGCGAGAGAGGGAGCCCCGGTTTGCTTTCTTGACCAAGAGCGAGATTGATCAGCTTGAAGATGGATATAGGTGGAGAAAATATGGACAGAAGGCAGTCAAAAACAGTCCTTACCCCAGAAGTTACTACAGATGCACCAGTCAAAAATGCGTAGTGAAGAAACGAGTAGAAAGATCATACCAAGATCCATCCCTGGTCATAACTACGTATGAAGGCCAACACATCCACCATTGCCCGGCTACACTCCGAGGCCATTCGTCTCCGTTTTACGCATCGGCATCGACGTCGACATTGGCAACGGCACCCTCCTCGGGACCACTCTTCTCGCATTTGCTATCAAAGAACTGCCAGACCGATCCCACGTCAATGATGTACCAAAATCTAAATCTCCAGCAACATCTTCAAATGCCTGATCATCATAGTCTGTTGCAGGATTTGTTCACTCAAAAATAG 810 47.78 MANDEGESKEYQQYDPFVYNQLDMNRTILQQQPSLDPAFMSFTNFIDTSLEYNSVWRALDVSCSSSELISPVDDMSKKKASNASVSSSSDEAAPAAEDDSVKSKKEEKRKKQNAAQKKEKREREPRFAFLTKSEIDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSLVITTYEGQHIHHCPATLRGHSSPFYASASTSTLATAPSSGPLFSHLLSKNCQTDPTSMMYQNLNLQQHLQMPDHHSLLQDLFTQK 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12951829 12952818 + Carg04668-RA Car11g01645 157598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01645 269 MobiDBLite consensus disorder prediction 95 125 - -
Car11g01645 269 Pfam WRKY DNA -binding domain 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car11g01645 269 MobiDBLite consensus disorder prediction 73 125 - -
Car11g01645 269 MobiDBLite consensus disorder prediction 73 93 - -
Car11g01645 269 ProSiteProfiles WRKY domain profile. 133 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car11g01645 269 Coils Coil 101 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01645 Car-Chr11:12951829 Car17g00350 Car-Chr17:2214403 3.57E-49 dispersed
Car03g00368 Car-Chr3:4515984 Car11g01645 Car-Chr11:12951829 2.07E-22 transposed
Car11g01645 Car-Chr11:12951829 Car19g00856 Car-Chr19:8938314 3.32E-134 wgd
Car11g01645 Car-Chr11:12951829 Car20g00226 Car-Chr20:1304429 2.90E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4363 PF03106 WRKY 1.30E-24 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01645 - - cmos:111437082 484.952