Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00031 ATGTCAAAACCGTGGGGCGGAATTGGAGCCTGGGCTGCTGATGCCGAGCGTGCTGAGGCTGAGGAACGAGAGGCGCAAGCTGCTGCGGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAAGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGCTGTCGGAATTCACTATGGGGACCTTGACTGGTCCGGGCGCCGGCAGTAGGCAAACAGACAGCAAGGGCTTGACGCCGGAGGAGATGCTTCGACTTCCGACTGGCCCCAAAGACCGTTCTGGTGAAGAAATGCGTCCTGGCCGACTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGCCTGCTGGTCGATTTCGGGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTTTGGTGGGTTCGATGATGATCGTAGGGATCCACCTCCTAGGGCTTCCAATTTCGACCAACCTTCAAGGGCTGACGAGGTGGATAATTGGGCAATGACTAAGAAATCTCCTACATTGGCTTCAGAGCGACAGAATAGGTACGGGTCGCTAGGCGGTGGCATGGGTGGAATTTCATCCAGGGCAGACGAGGTCGATAGCTGGGCCAGTGCGAAAAAACCTGTTCCATCGAGATCCTCCACTTTTGGTTCTGGTTACCGTGACCGTGAGGTGAATGAGCATGATCGCTGGACTAGAGGCAGTTCACGTGATAGTGACACAGAACGACCCCGGTTAGTATTGGATCGACCCAAAGCTAATCTCCTTACAAATGAAGCAACAAGGTCGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAAGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGACCTTCGAGTGCTCAATCGAGCCGTTCAGAGGGTCCAGGATTGCAGGGAGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGGAAGATAGATCTGCAACTTGAGCGTCGTGCTGTGGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGAAAGGCTTATCTCTGAATGCTAAGAAAGAATCGATGGAAGAATCTGCCGTAGAGATACAAAATCTGCGTGACAGAATAAATAAAAAAGAATGTGAACTGGAGGCGCTGGTCCTTGATTTGGATGATAAGGTACGCTTCGGGAAGAAAGCAGCTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCTGTCTTTCCCGAAAGACAATCTTCTCAAGTATCCTTTGATGAGTCCAGAAGTTTCGAGTCTATGGAACGGCCTCGATCACGTGGCACTCCAGATGTGTGGAGTAGATCTGCTGAGGATGGAAAACCAATACAAGGTGCCAGAGATGGAGGATTTTTGGGCAACAGAGACATGAACAGGTCGAGGGATAGATGGTAA 1560 51.35 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLKEAVNTKPKKKKMTLSEFTMGTLTGPGAGSRQTDSKGLTPEEMLRLPTGPKDRSGEEMRPGRLGGGFPTYDRHSMPAGRFRDRDEGDGSWGGGRRSFGGFDDDRRDPPPRASNFDQPSRADEVDNWAMTKKSPTLASERQNRYGSLGGGMGGISSRADEVDSWASAKKPVPSRSSTFGSGYRDREVNEHDRWTRGSSRDSDTERPRLVLDRPKANLLTNEATRSNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLERRAVDRPETEEEKMLKEEIDVLRKELEKGLSLNAKKESMEESAVEIQNLRDRINKKECELEALVLDLDDKVRFGKKAAERPGSGAGRAAVFPERQSSQVSFDESRSFESMERPRSRGTPDVWSRSAEDGKPIQGARDGGFLGNRDMNRSRDRW 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 155270 160572 - Carg20489-RA Car12g00031 157647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00031 519 MobiDBLite consensus disorder prediction 59 79 - -
Car12g00031 519 MobiDBLite consensus disorder prediction 471 489 - -
Car12g00031 519 Pfam Plant specific eukaryotic initiation factor 4B 1 505 IPR010433 GO:0003743
Car12g00031 519 MobiDBLite consensus disorder prediction 1 346 - -
Car12g00031 519 Coils Coil 15 37 - -
Car12g00031 519 MobiDBLite consensus disorder prediction 442 519 - -
Car12g00031 519 MobiDBLite consensus disorder prediction 305 324 - -
Car12g00031 519 Coils Coil 398 432 - -
Car12g00031 519 MobiDBLite consensus disorder prediction 278 304 - -
Car12g00031 519 MobiDBLite consensus disorder prediction 117 132 - -
Car12g00031 519 MobiDBLite consensus disorder prediction 224 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00031 Car-Chr12:155270 Car16g00611 Car-Chr16:3911868 5.80E-40 dispersed
Car12g00031 Car-Chr12:155270 Car05g00036 Car-Chr5:192126 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00031 - - csv:101206526 771.926