Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00098 TGTTCTTTGCCCATTCCCTCTTGCTTTCTATATTCGCTTATTCTTCTTTCCTTTTCCTCTGGTTGTCTCTGTCTTTTTCGCATTTCTGCTCCATTTTTGCAGCTTTCTGAAACCATGTCTTCATCCGAGAAGGAGAGAGAGACACAGGTCTACTTGGCCAAGCTCGCCGAGCAGGCAGAGCGCTATGACGAAATGGTTGAGTGTATGAAGAATATTGCAAAGCTTGATCTCGAACTAACTGTGGAGGAGAGGAACCTTCTTTCTGTCGGGTACAAAAATGTCATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGACCAAGGGAAATGAAGGCATTGTAAAATTGATAAAGGGTTACCGCCAGAAAGTAGAGGAGGAACTTTCAAAGATTTGTGGTGATATTCTCTCTATCATAGACAAGCATCTAATCCCCCATTCGTCCTCTGCAGAAGCCACTGTCTTCTACTACAAGATGAAAGGTGACTACTTTCGCTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAAGCTGCTGATCAGTCATTGAAGGGATATGAGGCTGCCTCAAGCACTGCGAATACTGAACTCCCATCAACCCACCCCATCCGGCTTGGCCTTGCTCTCAATTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTAGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTAATCATGCAACTGTTGAGAGACAACCTGACCCTCTGGACCTCAGATTTGCCTGAAGACGGCGGTGAAGAGAACGTCAAAGCTGAGGATTCCAAGCCTGTTGAACCTGAGCCCCAGCAAGCGAAATGA 909 45.21 CSLPIPSCFLYSLILLSFSSGCLCLFRISAPFLQLSETMSSSEKERETQVYLAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEETKGNEGIVKLIKGYRQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKMKGDYFRYLAEFKTDQDRKEAADQSLKGYEAASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENVKAEDSKPVEPEPQQAK 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 528217 530994 - Carg20587-RA Car12g00098 157714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00098 302 MobiDBLite consensus disorder prediction 275 302 - -
Car12g00098 302 ProSitePatterns 14-3-3 proteins signature 1. 84 94 IPR023409 -
Car12g00098 302 ProSitePatterns 14-3-3 proteins signature 2. 256 275 IPR023409 -
Car12g00098 302 Coils Coil 234 254 - -
Car12g00098 302 PRINTS 14-3-3 protein zeta signature 78 107 IPR000308 -
Car12g00098 302 PRINTS 14-3-3 protein zeta signature 127 151 IPR000308 -
Car12g00098 302 PRINTS 14-3-3 protein zeta signature 158 180 IPR000308 -
Car12g00098 302 PRINTS 14-3-3 protein zeta signature 193 219 IPR000308 -
Car12g00098 302 PRINTS 14-3-3 protein zeta signature 220 246 IPR000308 -
Car12g00098 302 PRINTS 14-3-3 protein zeta signature 247 276 IPR000308 -
Car12g00098 302 Pfam 14-3-3 protein 52 274 IPR023410 -
Car12g00098 302 Coils Coil 52 72 - -
Car12g00098 302 MobiDBLite consensus disorder prediction 280 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01576 Car-Chr11:12512982 Car12g00098 Car-Chr12:528217 5.53E-146 dispersed
Car12g00098 Car-Chr12:528217 Car19g00808 Car-Chr19:8705985 1.86E-147 dispersed
Car04g01734 Car-Chr4:9931031 Car12g00098 Car-Chr12:528217 1.00E-131 transposed
Car05g00394 Car-Chr5:2246930 Car12g00098 Car-Chr12:528217 2.82E-80 transposed
Car12g00098 Car-Chr12:528217 Car05g00393 Car-Chr5:2246184 1.76E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00098 - K06630 csv:101221858 499.975