Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00100 ATGCAGAAGGATATGAACAATATTGGGGTAAAGAAGAGAGGCCATGGGAATCGATCTTGGATAAAGATTGATCAGGAAGGGAACTCAGAGGTTTTGGAGCTTGAGAAGGCTACTATAATGAGGCATTGTTCTTTACCTTCAAGAGATATGCGACTTTTGGATCCACTCTTCCTTTGCCCGTCCACAATTCTCGGGAGGGAGAAGGCGATCGTTGTCAGTCTCGAGCAAATTCGGTGTATAATCACAGCTGATGAGGTGATTCTGATGAACTCCTTAGATGGGTGTGCTGCTCACTACAAGGCAGAGCTGTGCAAGCGTCTCCATGCAAGTAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCGCTGGAACTTACTTGTTCATTTCTTGACACTCAGATGAAGGGGATGGAAATCGAGATATACCCTCTACTGGATGCTTTAGCGTCTTCAATAAACACGCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGTCCTTGACTCAACAAGTGCAAAAGGTTCGTGATGAAGTCGAGCATCTGATGGACGATGATGGGGATATGGCAGAGATGTTTCTGACAGAAAAGAAACAAAGATTGGAAGCGAACATCCGAAGTAACTTGTATCTCGAAACTAGTTTCTTCGGGAAACCAAAATCTGCTCCTGTTTCACCAGTGGGTTCTACCAATGGATCTTATAAATTACAAAGGGCTTTTAGCAGTATTGTAAACTCGAGCAGCTTGATGAGTTCATCAAACGGTGGTGATAACGTCGAACAATTGGAGATGCTGCTCGAGGCGTACTTCGTGGTCATTGACGACATGCTTAGTAAATTGTTATCGCTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTCCAGGTGCTTTTCACTGCAGCTACGTTCTTGGCTACGATGTTTGCGGCGTTAACTGCAGTTTTCGGCATGAATTTTTCCGACGATGTCTTCGAGCATCCGACTTCTTTCCAGTGGATAGTTTACTTGACCTTGATTGCCTGTGGCCTTGTGTTTATCTCTTTTCTATTCTATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1146 43.11 MQKDMNNIGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITADEVILMNSLDGCAAHYKAELCKRLHASKDQSDDLPFEFRALELALELTCSFLDTQMKGMEIEIYPLLDALASSINTLNLERVRRFKGNLLSLTQQVQKVRDEVEHLMDDDGDMAEMFLTEKKQRLEANIRSNLYLETSFFGKPKSAPVSPVGSTNGSYKLQRAFSSIVNSSSLMSSSNGGDNVEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQVLFTAATFLATMFAALTAVFGMNFSDDVFEHPTSFQWIVYLTLIACGLVFISFLFYFRYKKIFPL 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 537639 542549 - Carg20585-RA Car12g00100 157716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00100 381 Coils Coil 165 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00100 Car-Chr12:537639 Car14g00950 Car-Chr14:5749064 6.70E-145 dispersed
Car12g00100 Car-Chr12:537639 Car01g00165 Car-Chr1:864890 9.26E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00100 K16075 - csv:101220835 630.943