Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00103 ATGTCATCACCAAACTTCCAAACCTTTCTTCTCCATTTCCCTTCTTCCATTTCCCAAAGCTTCCCAGCCCTTCTCTCCGCGCTGCTGCTTCTCTCCATTTTCGCCTTCTTCCTTCACCCCGGCGGCCTCGCTTGGGCCCTTTCCAAGTCCAAAACCGCCGCCTCTGCCGCCATCCCGGGCCCCTCCGGCTTCCCATTCATCGGTCTCCTCCATGTCTTCACTCTCTCAAAAACCCCTCACAAAGCCCTCTCTGCACTTTCCAATAAATTCAAAGCACACCCTTTAATGGCCTTCTCTGTTGGCCTAACCAAATTCGTAATTTCAAGCCACCCGGATTTTGCCAAGGAAATTCTCAATAGCGCTTCCTTTGCTGATAGGCCTGTGAAGGAATCCGCTTATGAACTTCTTTTCCACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGAAGGATTTCAGCTACTTATATGTTTAGTCCTAAGAGAATAGGTGCATTTGAAGGGTTTAGAAGGGAAGTTGGAGGGAAAATGATAAGGGAAGTTGAGAATTCCATGGCTTTGAATGGGGAAGTTAGAGTTAAGGAGATTCTTCATTTTGGGTCTTTGAATAATGTTATGATGACTGTTTTTGGTAAGTGTTATGAGTTTAGTGGATTGGGGAAAGATGGGGTTGAGCTTGAGGAACTGGTGAGTGAAGGGTATGAATTGCTTGGGATTTTCAATTGGAGTGATCATTTTCCCTTTCTGGGTTGGCTGGATTTACAAGGCGTGAGGAAAAGATGTAGGTGTTTGGCTTCTAAAGTGAATGTTTTTGTGGGAAAAATCATTGACGAACATAGAATGAGGAGGAAAGTTAAGCCACACCACGAACACCACGAACACGAAGAACACGAACAAGAACAAGAACATAATCGAGACTTTGTTGATGTCCTACTTGATATGGAGAAAGATGACAAGCTCTCAGATTCCGACATGATTGCTGTTCTTTGGGAAATGATTTTTCGAGGAACAGACACAGTGGCAATACTGTTGGAATGGATCATAGCTCGAATGGTTCTACACCCAGAAATCCAAACCAAAGCTCAAAACGAAATCGATTCAGTAATCGGCAAAAGATCCAAACCCATTTCAGATTCTGATATCCCAAATCTTCCATTTCTTCAATCCATTGTCAAAGAGTGTTTAAGACTGCACCCACCAGGTCCACTTCTATCATGGGCCAGGCTCGCAGTCAACGACGTGGACGTCGGCGGGAGGCTGATTCCTGCCGGGACGACGGCGATGGTGAACATGTGGGCAATAACACACAACGAAAAGGTTTGGTCAGAGGCTGAGAAGTTCAAGCCAAATAGGTTCATGGAAGAGGAAGTGAGTGTTATGGGAAGTGATTTGAGATTGGCTCCATTTGGGGCAGGGAGAAGAGTGTGCCCTGGAAAAGCCATGGGATTGGCCACTGTTCATCTCTGGTTGGCTCAGTTTCTTCAAGCTTTCAAGTGGGTTCCCTCTGAAAAGGGCATTAATGGCGTTGACTTGTCAGAATGTCTCAAACTCTCTTTGGAAATGCAAACTCCATTGATTTGCAGAGCTATCCCTAGGGTTCGCTAA 1617 45.52 MSSPNFQTFLLHFPSSISQSFPALLSALLLLSIFAFFLHPGGLAWALSKSKTAASAAIPGPSGFPFIGLLHVFTLSKTPHKALSALSNKFKAHPLMAFSVGLTKFVISSHPDFAKEILNSASFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFSPKRIGAFEGFRREVGGKMIREVENSMALNGEVRVKEILHFGSLNNVMMTVFGKCYEFSGLGKDGVELEELVSEGYELLGIFNWSDHFPFLGWLDLQGVRKRCRCLASKVNVFVGKIIDEHRMRRKVKPHHEHHEHEEHEQEQEHNRDFVDVLLDMEKDDKLSDSDMIAVLWEMIFRGTDTVAILLEWIIARMVLHPEIQTKAQNEIDSVIGKRSKPISDSDIPNLPFLQSIVKECLRLHPPGPLLSWARLAVNDVDVGGRLIPAGTTAMVNMWAITHNEKVWSEAEKFKPNRFMEEEVSVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQFLQAFKWVPSEKGINGVDLSECLKLSLEMQTPLICRAIPRVR 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 552560 554485 - Carg20582-RA Car12g00103 157719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00103 538 MobiDBLite consensus disorder prediction 288 307 - -
Car12g00103 538 MobiDBLite consensus disorder prediction 293 307 - -
Car12g00103 538 Pfam Cytochrome P450 59 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car12g00103 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00103 Car-Chr12:552560 Car17g00464 Car-Chr17:3250213 0 dispersed
Car13g00900 Car-Chr13:9369615 Car12g00103 Car-Chr12:552560 0 transposed
Car18g00648 Car-Chr18:7740965 Car12g00103 Car-Chr12:552560 0 transposed
Car12g00103 Car-Chr12:552560 Car05g00399 Car-Chr5:2272347 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00103 K20619 - csv:101221468 858.211