Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00137 ATGGCTGCTTTGATGGATTTCTATGGTTGCAGAGATCTTCAGTCGTATCCAGTTGGTGGTGAATTAATGGAAGCGCTTGAACCTTTTATGAAAGCTGCTTCCTCTTCTTCTTCTTCTTTCCTTCCTTCCTTTTCTCCTTCTTCTTCATCTTTCGTTCCTGATTTCTCCTCTTCTTTCTCTTCAATCCAAACGGAGTCCACTTCTTATCCTTCCGATTGCTCGCCGCCGGTGGCCTATTCATATTCCGACGGGTTTTCGGCTAACAACCTTCACGGTTTGGAGCAATCGGCTTCAATCGGACTCAATTACTTGACTCCCTTTCAGATCCAACAGATCCAATCTCAATTCGGTCTTCAGACTCAGATCCAGCCGGTTTGGGGACATGTTAACAACCAGCAAGAGCTAACGAAAAACCAGATGAACGGCGTGAATTTGCTTGGCCCGAAGGCGATTCCGATGAAACATGCGGGATCTCCACCGAAATCGACGAAGCTTTATCGAGGCGTGAGGCAAAGGCATTGGGGAAAATGGGTGGCTGAGATCCGTCTACCGAGAAACCGTACTCGGCTATGGCTAGGCACCTTCGACACCGCTGAAGAAGCCGCTTTAGCCTATGACAAAGCCGCCTACAAGCTCCGAGGCGATTTCGCCAGGCTTAATTTCCCTCAGCTGAAGCACCACGGCTCCTCCGTTGGCGGCGATTTCGGCGAGTACAAGCCGCTCCACTCCGCGGTCGATGCTAAGCTCGATGCCATATGCCAAACCTTGGCTGAGTCGCAAAAACAGGGGAAATCGAACCGATCTGTCTCCTCGAGGAAGTCGAAATCATCATCGATTTCTTCCACGGTCGGATCGGAGTCTCAGGCACCGACGGTGATTGATTCTGACGACGATCAGAAGGCTAGCGATGTCAGGTCGAGTGGATCGGAGATCTGTTGCAAGGCGGAGAACTCCTCGTCGCCGGTTTCAGCCGAGAGCGACGAGTCAGCAGGATCTTCGCCTTTATCAGATCTGACGTTCCCCGATCCGACAGATTCGCCATGGGAACAGCCGTCAGAAAGCTCTATGTTGCAGAAATATCCGTCTGAAATCGATTGGGCTTCGATTTTCACTTCATGA 1119 50.85 MAALMDFYGCRDLQSYPVGGELMEALEPFMKAASSSSSSFLPSFSPSSSSFVPDFSSSFSSIQTESTSYPSDCSPPVAYSYSDGFSANNLHGLEQSASIGLNYLTPFQIQQIQSQFGLQTQIQPVWGHVNNQQELTKNQMNGVNLLGPKAIPMKHAGSPPKSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPQLKHHGSSVGGDFGEYKPLHSAVDAKLDAICQTLAESQKQGKSNRSVSSRKSKSSSISSTVGSESQAPTVIDSDDDQKASDVRSSGSEICCKAENSSSPVSAESDESAGSSPLSDLTFPDPTDSPWEQPSESSMLQKYPSEIDWASIFTS 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 789433 790551 + Carg20548-RA Car12g00137 157753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00137 372 MobiDBLite consensus disorder prediction 258 295 - -
Car12g00137 372 ProSiteProfiles AP2/ERF domain profile. 165 222 IPR001471 GO:0003700|GO:0006355
Car12g00137 372 MobiDBLite consensus disorder prediction 311 360 - -
Car12g00137 372 Pfam AP2 domain 166 214 IPR001471 GO:0003700|GO:0006355
Car12g00137 372 MobiDBLite consensus disorder prediction 258 360 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00437 Car12g00137 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01185 Car-Chr4:6802992 Car12g00137 Car-Chr12:789433 1.10E-93 dispersed
Car09g00582 Car-Chr9:3296296 Car12g00137 Car-Chr12:789433 6.02E-100 dispersed
Car12g00137 Car-Chr12:789433 Car17g00086 Car-Chr17:500173 3.03E-34 dispersed
Car12g00137 Car-Chr12:789433 Car03g00727 Car-Chr3:6265098 1.96E-76 wgd
Car12g00137 Car-Chr12:789433 Car05g00437 Car-Chr5:2506940 0 wgd
Car12g00137 Car-Chr12:789433 Car07g00472 Car-Chr7:2377497 3.19E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4376 PF00847 AP2 5.00E-15 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00137 K09286 - csv:101222833 519.62