Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00168 ATGGCCGCCACCGTGCCGGACAATCTCTCTCGTGAGCAATATGTGTATCTAGCTAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGTCTCCGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTTGCTTACAAGAACGTGATTGGCTCACTTCGAGCTGCTTGGCGGATTGTTTCTTCCATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGAGGTCTGTGCTAGTATTTTGAAGCTTTTGGACTCGAATCTAATTCCATCGGCATGTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTATCATAGGTATATGGCGGAGTTTAAGGCTGGGGATGAGAGGAAAGCTGCTGCTGAGGATGCTATGCTGGCTTATAGGGATGCTCTGGATGTCGCAGTTGCGGATCTTGCACCCACTCATCCTATAAGGCTGGGTCTGGCACTCAACTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATCGCTGAGCTGGACACTTTGGGTGAAGAATCATACAAGGACAGCACCCTCATCATGCAGCTGTTGAGGGACAACCTCACGCTCTGGACTTCAGATGCGCAGGACCAGTTAGACGAGTCGTAG 759 48.62 MAATVPDNLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPVSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSEVCASILKLLDSNLIPSACASESKVFYLKMKGDYHRYMAEFKAGDERKAAAEDAMLAYRDALDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1031087 1033632 - Carg22526-RA Car12g00168 157784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00168 252 Coils Coil 245 252 - -
Car12g00168 252 Gene3D - 2 252 IPR036815 -
Car12g00168 252 Coils Coil 17 37 - -
Car12g00168 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Car12g00168 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Car12g00168 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Car12g00168 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Car12g00168 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Car12g00168 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Car12g00168 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Car12g00168 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Car12g00168 252 PANTHER BNAC02G00320D PROTEIN 8 248 - -
Car12g00168 252 PANTHER 14-3-3 PROTEIN 8 248 IPR000308 -
Car12g00168 252 SMART 1433_4 11 251 IPR023410 -
Car12g00168 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Car12g00168 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Car12g00168 252 PIRSF 14-3-3 7 252 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00495 Car-Chr9:2767971 Car12g00168 Car-Chr12:1031087 2.93E-131 dispersed
Car12g00154 Car-Chr12:881107 Car12g00168 Car-Chr12:1031087 1.53E-132 dispersed
Car12g00168 Car-Chr12:1031087 Car11g01576 Car-Chr11:12512982 4.44E-111 dispersed
Car12g00168 Car-Chr12:1031087 Car05g00505 Car-Chr5:2929181 1.05E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00168 K06630 - csv:101222827 456.447