Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00177 ATGAAAGGCGATTCCACCGCTACCGGTGTACATCCGCTGTTTAAGCACTTTTCCGACCCCAGCTCCGCCGTCACCGACGGCTCCACCATCGAGGTGGTGCGGCGGCCGAGGGGTCGACCGCCGGGGTCCAAAAATAAACCGAAACCGCCTCTTGTCATAACCCGGGAAAACGACTCGGCTATGCGGCCGTATGTTCTAGAAGTGCCTGGAGGAAACGACGTCGTTGAAGCAATTTCGCGGTTCTGTTGTCGGAAGAATATGGGTCTTTGTGTTCTTAACGGCTCTGGGACGGTTGCGAATGTTTCTCTCCGGCAACCCTCGGCAACTCCCGGCGCCGCCGTCACGTTTCACGGCCGGTTTGAAATACTTTCCATTTCGGCTACTGTGTTTCCTCAAACGACGGCGTTTCCTCTTCCCAATGGCTTCACCATCTCGCTTGCTGGACCTCAGGGACAAATCGTCGGCGGGTTGGTCGCCGGCGCCTTGATTTCCGCTGGTACAGTTTTTGTCGTTGCCTCGTCGTTCAATAACCCCTTGTACCACCGGCTACCGGATGAGAATGAGACTCAGAATTTGGGATCCGGTGGCAGCGGCGAGGCTCATTCCCCACATGTCTCCGGCGGCGGAGATAGTAGCGGGCACGGCCACGGGCAACCACTTCTGGAATCGTGTGGAGTGGCTATGTACAGTTGCCACGCACCGTCCGATGTAATATGGGCGCCGACGGCGAGACAACCGCCGCCGCCGCCGCCATACTGA 759 58.1 MKGDSTATGVHPLFKHFSDPSSAVTDGSTIEVVRRPRGRPPGSKNKPKPPLVITRENDSAMRPYVLEVPGGNDVVEAISRFCCRKNMGLCVLNGSGTVANVSLRQPSATPGAAVTFHGRFEILSISATVFPQTTAFPLPNGFTISLAGPQGQIVGGLVAGALISAGTVFVVASSFNNPLYHRLPDENETQNLGSGGSGEAHSPHVSGGGDSSGHGHGQPLLESCGVAMYSCHAPSDVIWAPTARQPPPPPPY 252
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 1096114 1096872 - Carg22517-RA Car12g00177 157793
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car12g00177 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 62 177 IPR005175 -
Car12g00177 252 ProSiteProfiles PPC domain profile profile. 58 196 IPR005175 -
Car12g00177 252 MobiDBLite consensus disorder prediction 182 217 - -
Car12g00177 252 MobiDBLite consensus disorder prediction 183 197 - -
Car12g00177 252 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00177 Car-Chr12:1096114 Car15g00111 Car-Chr15:651206 5.95E-49 dispersed
Car10g00817 Car-Chr10:4510276 Car12g00177 Car-Chr12:1096114 2.06E-52 transposed
Car01g01260 Car-Chr1:11456219 Car12g00177 Car-Chr12:1096114 2.55E-91 wgd
Car12g00177 Car-Chr12:1096114 Car05g00497 Car-Chr5:2875366 3.33E-120 wgd
Car12g00177 Car-Chr12:1096114 Car09g00523 Car-Chr9:2938508 4.89E-99 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00177 - - cmos:111454367 446.817