Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00209 ATGGTGATGCCCGAGTCGTCTGAACGCCACCGGACAGCGTCTCGTCGAGCGAATCAACCGCAACTTGGAGCTAGGGTTCCGCTCAAGCGGTTACTTCGCGTGGCATCTGTCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTCTCTCTTCTTACTCCTTATGTTCAAGAGCTTGGTATTCCTCATGCTTGGTCAAGTCTCATATGGCTCTGCGGACCGCTTTCTGGCCTCTTTGTCCAGCCTCTCGTTGGCCACATGAGCGATCGCTGCACCAGCCGATACGGCCGCCGGAGGCCATTCATTGTAGCTGGAGCGCTTTCCATTGTACTCGCCGTTCTTATTATCGGTCACTCGGCGGACCTCGGTTGGTTGATTGGTGACAGAGGTGATGTTAGGCCTCGTGCGATTGGATTCTTTGTGTTTGGATTTTGGATTCTCGATGTCGCTAACAACTTAACGCAGGGTCCTTGTAGAGCTTTGCTTGCTGATCTTACCGGTAAGGATCATCGAAGGAATCGAGTGGCAAATGCTTATTTTTCACTATTTATGGCGATTGGTAATATTTTTGGGTATGCCACTGGATCCTTTAGTGGCTGGTACAAGATCTTGCCGTTTACTCTTACCTCTGCATGCTCGGTTAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATGTCGTGTTCATTGCAATTACAACATATTTGAGTGTTTCAGCAGCTCAAGAGATTTCTCTAGATTCAAGCGGCAGGTCGTCCCTGGTAGTGGAAGACGGTATGGGGCAATCAAGTCATGCTTCAGAAGCATTTCTCTGGGAGTTGTTTCATACTTTTAGACACTTCTCTGGGTATATATGGGTAATTTTGCTTGTCACTTCCCTGACATGGGTAGCATGGTTTCCATTTATTCTATTTGATACTGATTGGATGGGTAGAGAGATTTATGGTGGCAAGCCAAATGAAGGACAGAGTTATAGTTCTGGAGTCAGAATGGGAGCATTTGGTCTGATGTTTAACTCTGTTGTCCTTGGAATAACTTCATTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGTTTTGTATGGGGAGTCTCTAATATTTTTATGGCTCTATGTTTCCTTTCTATACTGGTTGTCACCTATGTGGCAAACAATATGGGCTATATAGGCCATGAGCTTCCACCAAATAGTATCGTATCAGCTGCATTGATTATCTTTGCTCTTCTTGGCGTCCCTTTGGCAATTACTTACAGCATTCCATATGCCATGATCTCCTCGCGTGTTGAATCTTTGCAACTTGGTCAAGGTTTGTCTGCGGGTGTCTTGAACTTGGCAATAGTAATTCCTCAGGTTGTGGTATCCCTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAATTCTCCAGCTTTTGCTGTGGCAGCATTTGCAGCCTTTGCAAGTGGACTCATTGCTATCTTGGCCCTTCCTCGGTCTAGTGCTCAGAATCCCAGATCCCTCACATGA 1512 46.49 MVMPESSERHRTASRRANQPQLGARVPLKRLLRVASVACGIQFGWALQLSLLTPYVQELGIPHAWSSLIWLCGPLSGLFVQPLVGHMSDRCTSRYGRRRPFIVAGALSIVLAVLIIGHSADLGWLIGDRGDVRPRAIGFFVFGFWILDVANNLTQGPCRALLADLTGKDHRRNRVANAYFSLFMAIGNIFGYATGSFSGWYKILPFTLTSACSVNCANLKSAFLIDVVFIAITTYLSVSAAQEISLDSSGRSSLVVEDGMGQSSHASEAFLWELFHTFRHFSGYIWVILLVTSLTWVAWFPFILFDTDWMGREIYGGKPNEGQSYSSGVRMGAFGLMFNSVVLGITSLLMEKLCRKWGAGFVWGVSNIFMALCFLSILVVTYVANNMGYIGHELPPNSIVSAALIIFALLGVPLAITYSIPYAMISSRVESLQLGQGLSAGVLNLAIVIPQVVVSLGSGPWDQLFGGGNSPAFAVAAFAAFASGLIAILALPRSSAQNPRSLT 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1317264 1322342 - Carg22485-RA Car12g00209 157825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00209 503 Pfam MFS/sugar transport protein 44 191 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00514 Car12g00209 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00429 Car-Chr1:2464185 Car12g00209 Car-Chr12:1317264 1.87E-160 dispersed
Car05g00778 Car-Chr5:6094136 Car12g00209 Car-Chr12:1317264 8.18E-159 dispersed
Car05g00798 Car-Chr5:7151294 Car12g00209 Car-Chr12:1317264 7.10E-144 dispersed
Car12g00209 Car-Chr12:1317264 Car12g00703 Car-Chr12:5114889 1.09E-147 dispersed
Car05g00514 Car-Chr5:2996463 Car12g00209 Car-Chr12:1317264 2.14E-09 transposed
Car12g00209 Car-Chr12:1317264 Car05g00513 Car-Chr5:2994576 3.91E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00209 K15378 - csv:101220384 914.064