Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00281 ATGACGGCACCGGTGTCGATTGATGGGAAGGGGAAGGGGAAGGGAAGTATTGAGAATTTGGTGTCTGCTACTAGGTCGTTGAAGGCTAGTTTAGAGAAATCTAGGGATTTAGGGTTTGCGTTGCAGAAAGCTGGGTCGAGATTGGAGGATATTAGCCAAAGATTGCCGACTTTAGAAGCAGCTGTTCGGCCTATTCGTGCTGATAAGGAAGCTCTGGTCGCCGTCGGTGGCCATATAAATCGAGCTGTTGGCCCAGCGGCGGCGGTGCTTAAGGTTTTTGATGCGGTTCATGGCCTTGAAAAGTCTCTGTTATCGGACCCGAGGAATGATCTGCCTGGTTATTTGTCGGTATTGAAACGTATGGAAGAGGCATTGAGGTTCTTGGGAGATAACTGTGGACTTGCAATCCAGTGGTTGGAGGACATAGTTGAGTATTTGGAAGATAACAATGTTGCTGATGAGAGATATCTTGCGAATTTGAAGAAATCTTTGAAAATTTTGAGGGATTTGCAGAGTGATGAGGATAGGATTCGGCTTGATGGGGGGCTTTTGAATGCTGCTTTAGATAAACTAGAGAACGAGTTTAGGCGTCTTTTAACGGAGCACAGTGTGCCCCTTCCCATGTCGTCTTCCTCGTCGCTCGGTGAGCAGGCGTGCATTGCTCCATCTCCATTGCCTGTGACTGTTATTCAAAAATTGCAGGCTATTCTTGGGAGATTGATTGCTAATAATCGACTCGATAGATGCATATCCATTTACGTCGAAGTTCGTAGTTCTAACGTTAGGGCTAGTTTGCAGGCTCTGGATTTGGATTACTTGGAGATATCGGTTTCCGAGTTCAACGATGTGCAGAGCATTGAAGGGTACATCGCAAAATGGGGAAAGCATTTGGAGTTTGCTGTGAAACACTTGTTTGAAGCTGAGTTCAAGCTTTGTAATGATGTTTTTGAGAGGATTGGATTGGATGTTTGGATGGGCTGCTTTGCAAAGATAGTAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAGACTGTAACAGAGAGCAAGAACGATCCTATTAAGCTATTGAAGTTGTTAGATATCTTTGCATCCTTGAACAAACTGAGACTCGACTTTAATCGGCTCTTTGGCGGGGCTGCGTGTTTGGAAATTCAAAACCTGACTCGGGATCTCATTAAGCGGGTTATCGATGGCGTGGCTGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGTTACAGAGGCAAAACTCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAGCTTCATTATCGATTACAGTAATAAACTGCTCAGCGACGATTATCGGCCGATCCTGACCCAAGCTCTCGTCATTCACCGAAGTTGGAAGAAGGAAAAGTTCCAAGAGGGTCTTCTTATCGGTGAGGTTATGAATCTTGTTAGAGCCATCGAGCAGAATCTGGACGCTTGGATAAAGGCTTATGAAGATTCTACCTTGTCGAATTTTTTCGCCATGAACAACCATTGGCATCTACATAAGCACCTCAAAGGAACGAAAGTTGGAGAGCTAATGGGAGAGAAAGTAAAGGAACATGAACAGTATAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGCCATTTAAGCAGGGAGGGCTTGATCATGTTCTCGGGTGGGCGCGCTACTGCCCGTGATCTCGTCAAGAAACGTCTTAAGACGTTCAATGAAGCTTTTGAAGACATGTATAAGAAGCAATCAGTCTGGGTTATAACTGACAAAGAATTGAGGGAGAAGACATGCCAGCTTATAGTTCAAACGATCGTGCCTGTTTATCGCAGCTACATGCAGAATTATGGTCCTCTAGTCGAGCAAGACCCGAGTTCGAGTAAGTACGCGAAGTACACCGTGCAGAATCTGGAGAAAATGTTACTGTCCCTTTATCAGCCAAAGCCACTTAGGTTCAGCAGCCTTAAAGTTAGGCAGACTAGTGGGAAATTCAGCAATGGCGCAGCCGATCATCGTCGTTCCAACTCCATGGTTATGTAA 2055 45.06 MTAPVSIDGKGKGKGSIENLVSATRSLKASLEKSRDLGFALQKAGSRLEDISQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNNVADERYLANLKKSLKILRDLQSDEDRIRLDGGLLNAALDKLENEFRRLLTEHSVPLPMSSSSSLGEQACIAPSPLPVTVIQKLQAILGRLIANNRLDRCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIVTQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGVAEIFWELLVQVELQRQNSPPLDGAVPRLVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLIGEVMNLVRAIEQNLDAWIKAYEDSTLSNFFAMNNHWHLHKHLKGTKVGELMGEKVKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSVWVITDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDPSSSKYAKYTVQNLEKMLLSLYQPKPLRFSSLKVRQTSGKFSNGAADHRRSNSMVM 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1853872 1855926 - Carg03888-RA Car12g00281 157897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00281 684 Pfam Exo70 exocyst complex subunit 292 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00114 Car-Chr5:595700 Car12g00281 Car-Chr12:1853872 3.80E-69 dispersed
Car12g00281 Car-Chr12:1853872 Car04g01504 Car-Chr4:8745149 6.97E-68 dispersed
Car17g00602 Car-Chr17:5710345 Car12g00281 Car-Chr12:1853872 0 transposed
Car12g00281 Car-Chr12:1853872 Car05g00564 Car-Chr5:3312570 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00281 K07195 - csv:101207478 1233.39