Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00301 ATGGGGGCTCCATTCGAGGGAATAGTAAAAGATTTCAAGGGGAGGGCAGCCTGCTATAAGCAGGACTGGATATGTGCACTATGTTCGGGCGTCAGGATTTTAGCTCCTACTATGTACATATTCTTCGCCTCTGCCATTCCTGTCATTGCCTTCGGGGAGCAATTTAGTAGGGATACAGGTGGAAGACTGAGCACAGTGGAATCATTAGCCTCAACTGCAATTTGTGGAATTATCCACTCAATATTTGGGGGACAGCCTTTGCTGATTTTAGGAGTGGCAGAACCAACAGTTATAATGTACACTTACTTGTACAGTTTCAGCAAAGGCCGGCCGGAGTTAGGAGCCGAGCTCTTTTTAGCCTGGGCTGGATGGGTTTGCATTTGGTCGGGATTCTTCTTGATTCTCCTTGCAATCTTTAATGCTTGCGACATTATCACCAAATTTACAAGAGTTGCGGGGGAACTGTTTGGCATGCTTATTTCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATCAGCGAGTTCAATGCTCCCAAATCAGAAACTCCAGAGCCATTGGACTTAAAATTTGAATGGTTGTATGCAAATGGGTTGCTTGCCATCATTTTTGCCAACGGGGTACTCTTTTCAGCCCTGAAAAGCAGACATGCGAGATCATGGAAATATGGCACTGGCTGGTTTCGCAGTTTCATTGCAGACTATGGGGTTCCACTTGTGATCGTGTTATGGACAGCATTATCTTATGGAGTCCCCAGCAATGCTCCAGATGGAGTTCCGAGGAGACTCTTTTGTCCATTACCTTGGGAGCCGGCTTCAATGTACCATTGGACTGTAGCCAAGGACATGGGGAAGGTTCCAATGATTTACATCCTTGCTGCTGCTCTGCCAGCCATGATGATAGCAGGCCTTTACTTTTTTGACCATAGTGTTGCATCACAAATGGCGCAGCAGAAAGAGTTTAATCTTCAAAAACCATCTGCATATCATTATGATGTCTTCTTGCTCGGGATTATGACTTTGATTTGTGGATTGCTGGGACTACCTCCTTCTAATGGTGTCCTCCCACAGTCCCCAATGCACACCAAGAGTCTCGCAGTGCTTAAACGGCAGATAATACGAAAAAAAATGGTAAAGAGTGCACAGGAATGTATCAAACTAAAAGCAAGCAACTCTGAAGTTTATGGAAAGATGCAGGCGGCGTTCACTGAAATAGACGCATCTCCAACTCCTAAAGAGCTTGAGACCTTGACGAAGGCAGTAATGAGTGCTGATGACAGTGATCACAAGGGAAAATTCGACGCCGAGAAAAATATAGATCCTTATTTGCCTGTTTGTGTGAACGAACAAAGGATGAGCAACTTGCTGCAGTCCTTCCTTGTGGCCGCATCAATATTTGCTGTCCCTATAATGAGAATGATACCCACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTCCCAGGGAATCAGTTCTGGGAAAGGTTGTTGTTACTGTTTATCACACCGAGTCGGCGTTTCAAGGTCTTGGAGGGGTCTCATTTATCATTCGTTGAAACCGTGCCATTCAAAATCATTGTGTCGTTTACTCTCCTTCAGTTAGCATATTTCTTGTTGTGCTTTGGGATAACGTGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATCAGAGAGCATGTGCTCCCCAAATTCTTCCAGCATAACCATCTTCAAGAGCTAGATGCCTCAGAGTATGAGGAGATTGCCGGTGCTCCACATCGGAACCTCACAGTTACGGATAAGGAGATACGACCCGATTCAATTGCGGGCGAGAGTAACGAAGAATACTATGACGCCGAGATCTTAGATGAGATTACAACTCATAGAGGAGAACTAAAGCTTAGAACTGTAAGTTACAACGAAGAAAAGTTCTTTCAGGTTCATCCTGAAAGTTCAACTCGAACACAATGA 1983 44.73 MGAPFEGIVKDFKGRAACYKQDWICALCSGVRILAPTMYIFFASAIPVIAFGEQFSRDTGGRLSTVESLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYSFSKGRPELGAELFLAWAGWVCIWSGFFLILLAIFNACDIITKFTRVAGELFGMLISVLFFQEAIKGLISEFNAPKSETPEPLDLKFEWLYANGLLAIIFANGVLFSALKSRHARSWKYGTGWFRSFIADYGVPLVIVLWTALSYGVPSNAPDGVPRRLFCPLPWEPASMYHWTVAKDMGKVPMIYILAAALPAMMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQIIRKKMVKSAQECIKLKASNSEVYGKMQAAFTEIDASPTPKELETLTKAVMSADDSDHKGKFDAEKNIDPYLPVCVNEQRMSNLLQSFLVAASIFAVPIMRMIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFITPSRRFKVLEGSHLSFVETVPFKIIVSFTLLQLAYFLLCFGITWIPVAGILFPLPFFLLISIREHVLPKFFQHNHLQELDASEYEEIAGAPHRNLTVTDKEIRPDSIAGESNEEYYDAEILDEITTHRGELKLRTVSYNEEKFFQVHPESSTRTQ 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1968233 1973351 + Carg03908-RA Car12g00301 157917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00301 660 Pfam HCO3- transporter family 198 371 IPR011531 GO:0006820|GO:0016021
Car12g00301 660 Pfam HCO3- transporter family 447 535 IPR011531 GO:0006820|GO:0016021
Car12g00301 660 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00340 Car12g00301 CCT
Car05g00340 Car12g00301 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00301 Car-Chr12:1968233 Car13g00726 Car-Chr13:8400842 0 dispersed
Car12g00301 Car-Chr12:1968233 Car14g01175 Car-Chr14:10280750 0 wgd
Car12g00301 Car-Chr12:1968233 Car05g00340 Car-Chr5:1957549 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00301 K24194 - csv:101220188 1152.5