Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00372 ATGTCTCTCTTCTTCACCTTTCTTCTCCTCTTTTCTTCTCTCTTTTCGTCTCTCGATGCCTTGACCTACCGCTATTACGACCATACGTGCCCTAATCTCGAGTCCATCGTTGCCCGAGAAGTCCACCTAGCCACTGTCAACGATAAGACGGTTCCTGCAGCACTGCTCCGAATGCACTTCCACGACTGTTTCATTAGAGGTTGTGATGGGTCTGTGCTTCTCGACTCAAAGGGGAAGAACAAGGCGGAAAAAGACGGCCCTCCTAATATATCGTTACATGCTTTTTATGTCATTGATAAGGCTAAGAAGGCTATTGAATCTGCTTGCCCTGGTGTTGTTTCTTGTGCTGATATCCTAGCTCTCGCTGCTCGAGATGCTGTTGTTGTGTCGGGAGGTCCTCATTGGGATGTCCCGAAAGGAAGAAAAGACGGAAGAATCTCAAAAGCAAATGAAACCATACAATTGCCTTTTCCGACATTCAACTTCTCCCAACTCCAACAAAGCTTCTCTCAACGAGGGCTTTCCATACAAGATCTCGTAGCTCTATCAGGTGGACACACATTAGGATTCGCCCATTGCTCGTCATTCCAAAACCGAATCCATAATTTCAACTCGACCGTCGACATCGACCCGTTGTTGCAACCATCATTCGCGGCCAGTCTCCGGAGCATATGTCCAGCTCACAACAAGGTGAAGAACGCCGGGTCCGCCATGGATTCAACTACCACAGTGTTTGACAATGCATACTTCAAGCTGCTTCTTCAAGGGCGGAGCATTTTTTCTTCCGATCAATCTTTGCTTTCAACGCCGTATTCAAAGGCTTTGGTGTCTAAATTCGCCAATGAACAACGCCACTTTGAGAAGGCGTTTGTGAAGTCCATGGTCAAGATGAGTCGGATCGCCGGCGCCGGCGAAGAAGTCCGGCTAAACTGCCGGGTGGTCAGATAA 948 48.21 MSLFFTFLLLFSSLFSSLDALTYRYYDHTCPNLESIVAREVHLATVNDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDKAKKAIESACPGVVSCADILALAARDAVVVSGGPHWDVPKGRKDGRISKANETIQLPFPTFNFSQLQQSFSQRGLSIQDLVALSGGHTLGFAHCSSFQNRIHNFNSTVDIDPLLQPSFAASLRSICPAHNKVKNAGSAMDSTTTVFDNAYFKLLLQGRSIFSSDQSLLSTPYSKALVSKFANEQRHFEKAFVKSMVKMSRIAGAGEEVRLNCRVVR 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2373390 2374693 - Carg03979-RA Car12g00372 157988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00372 315 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car12g00372 315 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car12g00372 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00372 Car-Chr12:2373390 Car11g01524 Car-Chr11:12264702 5.71E-81 dispersed
Car18g01118 Car-Chr18:11187680 Car12g00372 Car-Chr12:2373390 3.54E-125 transposed
Car12g00372 Car-Chr12:2373390 Car03g00608 Car-Chr3:5637620 9.30E-153 wgd
Car12g00372 Car-Chr12:2373390 Car07g00357 Car-Chr7:1801617 1.66E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00372 K00430 - csv:101214403 525.783