Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car12g00412 | ATGGCGGACACGGGCTCGGTCTCGAACAAGAGAATGTCGTGTTCGATCCCCGAGAGGTTCCAGCTCCACGCCGCCATGTTAGCCTTGCAATTCGGCTACGCTGGCTTCCATGTCGTCTCTAGAGCTGCCCTCAATATGGGCATTAGTAAACTCGTCTTCCCTGTCTATCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTTGCATATTTCATGGAAAAGAAGGATAGGCCTGCGCTTACTCTCAACTTTGTTCTTCAGTTCTTCCTCCTCGCTCTCGTTGGAATTACTGCAAATCAAGGGTTTTACTTGTTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAGAATTCTGTCCCTGCTATTACTTTCCTCATGGCTGTACTTCTCCGGATAGAACAAGTTCGACTAAACCGGAAAGATGGGATAGCGAAGGTGGTAGGGACTCTATGCTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGTCCCACCGTCTACAGCCCGGCGACGACAGTGACGGTGCACAGCACGGCGGAGACGGCGGGGAAGCTGATGGGGCCGGGAATGTTCCCGTCACTAGGCGACGCAAAGGGCAAAAGCTGGACGTTAGGGTGCGTGTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTGGTTCTACAAGCTCCGGTGCTGAAAAAGTACCCGGCTCGACTCTCCGTCACGTCATTCACTTGCTTTTTTGGCCTCGTCCAATTCTTCATCATTGCTGCCGCGTTTGAGCGCGATGCTCAAGCTTGGCTCTTCCATTCCGACGCCGAAGCCTTCAGCATTGTTTATGCGGGGGTGGTGGCTTCCGGGATAGCGTTCGCGGTACAGATATGGTGCATTGACAGAGGTGGTCCGGTCTTTGTGGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCGCTCATGGCTTCCTTCGCTTTGGGTGAAGAGTTTTACTTGGGAGGGATCATAGGGGCGGTGCTGATTATATCGGGACTATACCTTGTGCTGTGGGGCAAGAGCGAAGAGAAGAAGCTCTTATTGGAATGGGCAGTAATCCAGTCTGCTCCGGACCATGTTACCAGCAGAACAAGCGGCCACATCAAGCCGTCTCTTAACCAGCCACTCCTGCATCCTACGGCTGAAAATGTTTGA | 1182 | 52.88 | MADTGSVSNKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFMEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVLLRIEQVRLNRKDGIAKVVGTLCCVAGATVITLYKGPTVYSPATTVTVHSTAETAGKLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLVQFFIIAAAFERDAQAWLFHSDAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKLLLEWAVIQSAPDHVTSRTSGHIKPSLNQPLLHPTAENV | 393 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 2632584 | 2636047 | + | Carg04020-RA | Car12g00412 | 158028 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car12g00412 | 393 | Pfam | EamA-like transporter family | 26 | 163 | IPR000620 | GO:0016020|GO:0016021 | |
| Car12g00412 | 393 | Pfam | EamA-like transporter family | 208 | 346 | IPR000620 | GO:0016020|GO:0016021 | |
| Car12g00412 | 393 | MobiDBLite | consensus disorder prediction | 373 | 393 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car05g00227 | Car12g00412 | CCT | |
| Car05g00227 | Car12g00412 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00112 | Car-Chr9:552050 | Car12g00412 | Car-Chr12:2632584 | 3.39E-47 | dispersed | |
| Car11g00270 | Car-Chr11:1484703 | Car12g00412 | Car-Chr12:2632584 | 1.14E-131 | dispersed | |
| Car12g00412 | Car-Chr12:2632584 | Car09g00716 | Car-Chr9:4243046 | 1.65E-80 | dispersed | |
| Car14g00456 | Car-Chr14:2398528 | Car12g00412 | Car-Chr12:2632584 | 2.75E-51 | dispersed | |
| Car15g01200 | Car-Chr15:9339307 | Car12g00412 | Car-Chr12:2632584 | 4.88E-67 | dispersed | |
| Car09g00674 | Car-Chr9:3967974 | Car12g00412 | Car-Chr12:2632584 | 8.56E-44 | transposed | |
| Car09g00675 | Car-Chr9:3970433 | Car12g00412 | Car-Chr12:2632584 | 1.21E-25 | transposed | |
| Car06g00703 | Car-Chr6:4281335 | Car12g00412 | Car-Chr12:2632584 | 6.02E-36 | transposed | |
| Car12g00412 | Car-Chr12:2632584 | Car05g00227 | Car-Chr5:1189261 | 0 | wgd | |
| Car12g00412 | Car-Chr12:2632584 | Car09g00111 | Car-Chr9:551336 | 2.50E-75 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car12g00412 | - | - | csv:101210562 | 711.064 |