Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00427 ATGCCCTTTTCGCTCTGCTTTTGGTGCTTTCCGGCCGCCGCTTTGGGCGGAGCTGCCCTCTCGATCCTCATTGTTTTCCTATTTTCTGTGATGAGTAGCGCGCGGCGGCCGAGTTCTCATTCTCCTCCTCCTCCTCCTGGAAGCAGAGGATTGCCTTTGATCGGAGAGACAATCCAGTTCATGGCCGCCGTCAATAGCAGCAACGGCGTTTATGATTTCGTCAGAATCCGCTGCCTCCGATATGGAAGATGTTTCAAGACTCGGATATTTGGGGAGACGCATGTGTTCGTATCGAGCACCGAGTCGGCGAAGCAGATACTCAACGACGGCGGGGTCAACTACACCAAGAAGTACATAAGGTCCATTGCAGAGCTAGTCGGGCATCGGAGTTTGCTCTGCGCCTCGCATCTTGACCACAAGTTCTTACGCAGCCATCTCATCAATCTATTCTCTACCAGTTTTTTGGCTTCCTTTGTCACGCAGTTCGATCAGCAGATCGTTGAGGCGCTTCGAGGCTGGGAAAGTGGATCCACCATTGTCCTCCTCAACCAAGCCCTCAAGATAACATGCAAAGCAATGTGCAAAATGCTAATGAGTATACAAAACGACGACGAATTAGAGCTACTCCAAAAGGAGGTAGCTCATGTATGTGAAGCTATGCTTGCATTCCCATGGCGATTTCCTGGGACAAGATTCCACAACGGCCTCAAGGCAAGAAGAAGAATCATTAAAATACTCGAAAAGATGATACGGGAGCGACGAAGATCAGAAGCTTGGCACGACGATTTCTTGCAACGGTTGTTGACGGAGGAGGGCGACGATAGTAGAGGAGCGTTGTCGGATGTGGAGATCGGAGATAACATATTGACGATGTTGATTGCAGGACAAGATACGACGGCAAGTGCCATCACGTGGATGGTGAAGTTCTTGGACGAGAACCCTGATGTTCTTCCAAATTTGAAGGATGAACAATTTGAGATATTGAACAAACAACGAGATCGTGATCGTGAGAGTTGTTTCCTTACGTTGGAAGATCTTGGCAACATGTGTTATGCTCCTAAGGTAGTAAAAGAATCCTTGAGGTTAGCATCGGTGGTGCCATGGTTCCCAAGGCTAGTCCTCCAAGACTCTCAAATTCAAGGTTACAAAGTCAACAAAGGTTGGAATGTCAACATTGATGTAAGGTCACTACACTCGCATCCTTCTATCTACCATCACCCTCTCATCTTCAATCCTTCCAGATTTGATGAAGAAGCAAAGCCCTATAGTTTTCTAGCGTTTGGAATGGGAGGGAGGCAATGTCTAGGGATGAACCTGGCCAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGGTGACTTCTTACAGGTGA 1371 47.99 MPFSLCFWCFPAAALGGAALSILIVFLFSVMSSARRPSSHSPPPPPGSRGLPLIGETIQFMAAVNSSNGVYDFVRIRCLRYGRCFKTRIFGETHVFVSSTESAKQILNDGGVNYTKKYIRSIAELVGHRSLLCASHLDHKFLRSHLINLFSTSFLASFVTQFDQQIVEALRGWESGSTIVLLNQALKITCKAMCKMLMSIQNDDELELLQKEVAHVCEAMLAFPWRFPGTRFHNGLKARRRIIKILEKMIRERRRSEAWHDDFLQRLLTEEGDDSRGALSDVEIGDNILTMLIAGQDTTASAITWMVKFLDENPDVLPNLKDEQFEILNKQRDRDRESCFLTLEDLGNMCYAPKVVKESLRLASVVPWFPRLVLQDSQIQGYKVNKGWNVNIDVRSLHSHPSIYHHPLIFNPSRFDEEAKPYSFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTSYR 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2734101 2738308 + Carg04035-RA Car12g00427 158043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00427 456 Pfam Cytochrome P450 45 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car12g00427 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00427 Car-Chr12:2734101 Car01g01434 Car-Chr1:12370923 5.44E-67 dispersed
Car12g00427 Car-Chr12:2734101 Car03g00664 Car-Chr3:5918511 8.12E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00427 - - cmos:111454446 878.241