Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00471 ATGTCGGTATCTTTCATAACAATCCCTTGTCTTCAACCTCCGTGGCGGTTCCCGTCGCAAAAAGCGCCGGCGAGACGTCGTTCAAAGGTGGGCTCTGTTTCTCTACCCAAAATCTATGCCGTGGATCAGTCGTCGTCTCCGTCCGTTCAAACGCAGCAGCGGACGACGAAGCTTCCGTTGAGGAAGATTCCCGGCGACCATGGTCCGCCGGTGCTCGGAGCAACCAATATGCCGCCGGGTCCGTTCATCAGCTCCGATCCTCGAGTTGTCGTTTTGCTCGACGGCAAAAGTTTCCCTGTTTTGTTCGACAATTCCAAGGTTGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCTTCAACGGAACTCACCGGCGGCTACCGGGTTCTGTCTTATATTGATCCATCGGAGCCGAGTCACCAGAAGCTTAAGCAACTGTTGTTCTTTCTCCTCAAGCACCGCCGGGATAAAATCTTGCCGGAATTTCATTCTGTTTTTTCAGAGCTTTTCGATACTCTGGAGAAGGATTTGGCCGCCACCGGTAGAGCAAAGTACAATGATCCCGGTGAACAGGCGGCGTTTAATTTCTTGACTCGATCTCTCTACGGTGTTAATCCGGCGAATACCAAATTGGGCCAAGACGCTCCGAAATTGATTGGGAAATGGGTTCTGTTCCAGCTTGGCCCTGTTTTAAATCTCGGCCTCCCCAAGTTCGCCGAGGAGCTCCTCCTCCGCACAGTCCGGCTACCACCGGCGCTGGTTAAAGCCGATTACCAGCGGCTTTACGACTTCTTTTACCAGTCGTCGGCGGCGGTGTTTGAAGAAGCAGAGAAATTGGGGATTTCGAAGGAAGAAGCTTGCCATAACTTGCTCTTCGCGACATGTTTCAATTCATTCGGAGGAATGAAGATTTTCTTCCCCAATATGCTCAAATGGCTTGGCCGCGCCGGAGCAACTCTACACGGCCGACTCGCGGAGGAGATTCGCACCGCCGTTAAATCCCACGGCGGGGAAATCACAATGGCGGCTATGGAACAGATGCCGTTGATGAAATCAGTGGTGTACGAATCGTTCAGAATCGAGCCGCCGGTGCCAGTTCAGTACGGTCGGGCGAAGCAGGATCTTGTGATAGAAAGCCACGACGCGGCGTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTATCAGCCATTTGCGACCAGAGACCCGAAAATCTTCGACAGAGCCGACGAATTCGTGCCCGATCGGTTCATCGGCGACGGCGAAAAGTTACTGCAGCACGTGCTCTGGTCAAACGGTCCGGAGACTCAATCGCCGTCGCTTAAGGACAAGCAGTGCGTCGGAAAGGACTTTATCGTTTTTATCTCTCCTTCTCGTCGTCGAACTCTTCCTCCGATATGA 1401 52.53 MSVSFITIPCLQPPWRFPSQKAPARRRSKVGSVSLPKIYAVDQSSSPSVQTQQRTTKLPLRKIPGDHGPPVLGATNMPPGPFISSDPRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPSTELTGGYRVLSYIDPSEPSHQKLKQLLFFLLKHRRDKILPEFHSVFSELFDTLEKDLAATGRAKYNDPGEQAAFNFLTRSLYGVNPANTKLGQDAPKLIGKWVLFQLGPVLNLGLPKFAEELLLRTVRLPPALVKADYQRLYDFFYQSSAAVFEEAEKLGISKEEACHNLLFATCFNSFGGMKIFFPNMLKWLGRAGATLHGRLAEEIRTAVKSHGGEITMAAMEQMPLMKSVVYESFRIEPPVPVQYGRAKQDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRADEFVPDRFIGDGEKLLQHVLWSNGPETQSPSLKDKQCVGKDFIVFISPSRRRTLPPI 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2961430 2962919 + Carg04079-RA Car12g00471 158087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00471 466 MobiDBLite consensus disorder prediction 44 64 - -
Car12g00471 466 MobiDBLite consensus disorder prediction 44 58 - -
Car12g00471 466 Pfam Cytochrome P450 323 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00177 Car12g00471 CCT
Car05g00177 Car12g00471 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00471 Car-Chr12:2961430 Car19g00703 Car-Chr19:8134006 2.63E-100 dispersed
Car11g01070 Car-Chr11:8272837 Car12g00471 Car-Chr12:2961430 2.16E-138 wgd
Car12g00471 Car-Chr12:2961430 Car19g00487 Car-Chr19:6480823 2.82E-145 wgd
Car12g00471 Car-Chr12:2961430 Car05g00177 Car-Chr5:943887 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00471 K01723 - csv:101221732 729.939