Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00509 ATGAAGAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCATGTTCGATCCGAGAGGAATTTACTTGCAGAGGTTGATAGTCGATGCATTGTAAAACTCTTCTATTCTTTTCAAGACTCTGAATTCTTATACCTTATTATGGAGTATTTACCTGGCGGTGACATTATGACATTACTAATGAGAGAAGACGTTCTGTCGGAGGATGTTGCTCGCTTTTACATAGCAGAGAGCGTTTTAGCTATTCATTCAATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAGAATGGCCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCAAGTATACTTTTGAATGACGAAGATTTAACAGCCCCAGCAGGCCAAAAGTGA 429 39.16 MKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDVLSEDVARFYIAESVLAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLTAPAGQK 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3373928 3379535 - Carg26153-RA Car12g00509 158125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00509 142 Pfam Protein kinase domain 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car12g00509 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car12g00509 142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00509 Car-Chr12:3373928 Car11g01403 Car-Chr11:11520528 2.07E-86 dispersed
Car12g00509 Car-Chr12:3373928 Car05g00155 Car-Chr5:804397 3.12E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89225 PF00069 Pkinase 7.50E-33 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00509 K08790 - csv:101222805 273.092