Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00547 ATGGAGGACGCCTTTTCCAGATCTATCTCTGAGGTCTTGGGATTTTTTGGGGTTGACCCATCACAAGGTCTCACAGACGATCAGGTTTTGCATCATGCTAGAGTTTATGGAAAAAATGGTACGTTTTCTGACCCTGGTTCTAGACCGAAGTTTATTTTGGTGATTTGGTTCCCCTGGATGGAAAGAGGGGCCCCATTTTGGAAACTGATTTTGAAGCAGTTTGATGATTTACTAGTGAAGATATTAATTGTTGCAGCAGTTGTTTCTTTCCTATTGGCTTTGATAAATGGAGAGACAGGCATAATAGCATTTTTGGAGCCTTCAGTAATTCTAATGATATTGGCTGCGAATGCAGCAGTAGGAGTGATTACAGAAACAAATGCCGAAAAGGCTCTTGTGGAACTACGGGCATACCAGGCAGATATTGCTACTGTGATGAGAAATGGTATTGTCTTCTTTCCAAGTGTTTCTATTTTGTTCTTCAATGCTATTCACCGCAAGGTATCTTTTGCAGGTTGCTTTTCAATACTTCCGGCTACAGAGCTTGTTCCTGGTGATATTGTAGAAGTTGCTGTGGGGTGCAAAATTCCTGCTGATATGCGAATGATTGAGATGCTTAGTAATCAGCTGCGTGTTGATCAAGCAATTCTTACAGGTGAGAGCTGCTCTGTTGAAAAAGAGCTGGAGGCCACAAGAGCAGTAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGCACTGTGGTGGTTGCTGGCAGGGCACGTGCTGTTGTGGTAGGAGTTGGTGCAAATACTGCTATGGGCAATATACGAGACTCTATATTGCAAACGGATGATGAGGTGACACCATTGAAAAAGAAGCTAGATGAATTTGGTACTTTTCTGGCCAAGGTTATTGCTGGAATTTGTGCACTTGTATGGATAGTGAACATTGGTCACTTTCGAGATCCTTCTCATGGTGGGATTTTGAGTGGTGCAATACACTACTTCAAGATTGCAGTTGCTCTTGCTGTTGCAGCGATTCCTGAAGGACTTCCTGCCGTTGTCACAACACTAAGTGACAACATGAAATTGCGACAGTCTAGAATATTGACAGAACATATAGTGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCTGAGTACAATGTCAGCGGTACAACGTACGCTCCTGATGGTACTATTTTTGACAGCACTGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACACATGGCAATGGGCTCTGCCCTCTGCAACGAGTCTACTTTGCAGTATAATCCAGATAAGGGGAACTACGAAAAAATTGGTGAATCAACTGAAGTAGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCAATGCCTTTTGCTCTAAATATGCTAAGCAAGCATGAGCGCGCATCCTATTGTAACCACCATTGGGAGAACCAGTTCAAAAAGATTTCTGTATTGGAATTTTCTCGTGATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATCCTTTTCTCCAAAGGTGCTCCTGAGAGCATTATTTCGAGATGCTCAAGTGTCCTTTGCAATGAAGATGGTTCTACCAGTGTTTTAACTTCTAGTATTCGTGCTGAACTGGAAGCAAGATTTCAAAGTTTTGCAGGAAATGAAATGCTTAGGTGCCTGGCTATAGCAATCAAATTGCTTCCTGTGAGTCAACAGAGTTTATCATTTGATGATGAGCAAGACCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGTATGAATGCTGGCATACGTGTTATAGTCGTAACTGGGGACAACAAGTCAACTGCTGAATCACTCTGCCGCAAGATTGGTGCTTTTGACCATTTGGTAGATCTAGCTGATCATTCTTTTACTGCTTCTGAATTTGAAGAGCTACCTGCAATGCAACAAACAATGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCATAAGCAAATGCTTGTGGAGGCCTTACAACATCAGAATGAAGTGGTTGCTATGACAGGTGATGGTGTCAATGATGCACCTGCACTGAAGAAAGCTGATATTGGTATTGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCATCTGATATGGTCTTAGCTGATGACAATTTTGCTACTATTGTTGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTTTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACTCTTGCCCCTGTGCAACTTCTTTGGGTTAACTTGGTCACTGATGGATTGCCTGCAACTGCAATTGGATTTAATAAGCAAGACTCCGATGTAATGAAATCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGATGGTTGTTCTTTCGTTATTTGGTAATTGGAGGTAGGGCAATGAATGACCTAACTTGGTTTCTTCCATGGAATAGCTTTAATTCTCAGCACATTCAAATTAAATGCTGTTCTCAGCTGTTAAAAGCTGGTAAAAAGTTTTTGAATGGTTATATCATTGGTGCAGCGTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCCGACAGTGGTCCTAAGCTACCTTACGCTGAGTTGATGAGTTTTGATACTTGTTCAACAAGAGCGACAACATACCCTTGCAGTATATTTGAGGATCGGCATCCATCGACTGTTTCTATGACTGTACTTGTTGTCGTCGAGATGTTCAATGCTTTAAATAATCTAAGCGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCATAACCATGATCCTTCACATGCTTATTATGTATGTGCGACCACTAGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTTTGTACCTTTCGTTTCCTGTAATATTCGCACCCCTTGCCTCATTTTCTGTTGTACAATTTCAGTTTTTCTTATTCCCTCAGGATCATGGTTTCGTTTCCTGGTTGAGGCTTCCATTTAGATTCAGAAGGCATGAGTTGCTTCCAAAGAAGGAATTGCGTGACAAGTAG 3201 41.77 MEDAFSRSISEVLGFFGVDPSQGLTDDQVLHHARVYGKNGTFSDPGSRPKFILVIWFPWMERGAPFWKLILKQFDDLLVKILIVAAVVSFLLALINGETGIIAFLEPSVILMILAANAAVGVITETNAEKALVELRAYQADIATVMRNGIVFFPSVSILFFNAIHRKVSFAGCFSILPATELVPGDIVEVAVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELEATRAVNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICALVWIVNIGHFRDPSHGGILSGAIHYFKIAVALAVAAIPEGLPAVVTTLSDNMKLRQSRILTEHIVICVVHSVLHGPQLSEYNVSGTTYAPDGTIFDSTGVQLEFPAQLPCILHMAMGSALCNESTLQYNPDKGNYEKIGESTEVALRVFAEKVGLPGFTSMPFALNMLSKHERASYCNHHWENQFKKISVLEFSRDRKMMSILCSRNQSHILFSKGAPESIISRCSSVLCNEDGSTSVLTSSIRAELEARFQSFAGNEMLRCLAIAIKLLPVSQQSLSFDDEQDLTFIGLVGMLDPPREEVRNAMLSCMNAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLADHSFTASEFEELPAMQQTMALQRMALFTRVEPSHKQMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKSKPRKVNEAVVTGWLFFRYLVIGGRAMNDLTWFLPWNSFNSQHIQIKCCSQLLKAGKKFLNGYIIGAAYVGLATIAGFIWWFIYSDSGPKLPYAELMSFDTCSTRATTYPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVITMILHMLIMYVRPLAVLFSVTPLSWAEWTMVLYLSFPVIFAPLASFSVVQFQFFLFPQDHGFVSWLRLPFRFRRHELLPKKELRDK 1066
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3620443 3645731 + Carg16387-RA Car12g00547 158163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00547 1066 Pfam Cation transporter/ATPase, N-terminus 62 89 IPR004014 -
Car12g00547 1066 Pfam Cation transporting ATPase, C-terminus 785 841 IPR006068 -
Car12g00547 1066 Pfam Cation transporting ATPase, C-terminus 881 1020 IPR006068 -
Car12g00547 1066 Pfam haloacid dehalogenase-like hydrolase 593 715 - -
Car12g00547 1066 Pfam Cation transport ATPase (P-type) 425 534 - -
Car12g00547 1066 Pfam E1-E2 ATPase 176 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00528 Car-Chr1:3084223 Car12g00547 Car-Chr12:3620443 0 dispersed
Car12g00547 Car-Chr12:3620443 Car13g00117 Car-Chr13:1022047 0 dispersed
Car12g00547 Car-Chr12:3620443 Car03g00827 Car-Chr3:6730670 5.38E-60 wgd
Car12g00547 Car-Chr12:3620443 Car07g00570 Car-Chr7:2892947 5.87E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00547 K05853 - csv:101211345 1652.49