Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00556 ATGGCTAATTGGTGGAGAAAAGAGAGCCATAAAGGAACCCCTGTTGTTGTAAAGATGGAGAATCCCAACTGGTCAATGGTTGAACTTCAAGGCCCTTCCGATGATGACTTCATTATCGCCGCCGAGTCGCCGCCGGGTAGAATCAGAGAGAAAGGACGAGGAAAAAACGCCAAGCAACTCACTTGGGTTCTTCTTCTTAAAGCTCATAAGGCTGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGGTTAATATCGGCGCTGCTGTTAAACGTCGTGTTGCTTCCGGTAAAACCGATGCCGACCTCGACAACGACAATGACAACGCCGACAGCGGCGAGAGGGAAAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGATTTTCCTTTGGGTGTCGGTGGGTCTATTAGGGTTTGAAGTGGCGGCGTATTACAAGGGCTGGCATTTTAGGGCACCCCATCTTGAATTGAACTACTTTTGGGCATACCCATTTGGGGTTAAGGATGTTTTTGATTGGATTTACTCGAAATGGGTTGTGATTCGTGTGGATTATTTTGCTCCTCCTCTCCAGTTCTTGGCCAATGTTTGTATAGTGTTGTTCCTCATTCAAACTCTGGATAGGTTGATTCTTTGTTTGGGTTGTTTCTGGATCCGCTTCAAGAAAATCAAACCGGTTCCGAATGCTTCGGCGTTCGATCTTGAATCTGGAGAGACTGGTTACTTCCCTATGGTTCTTGTTCAGATCCCAATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTAGACTGGCCAAAAGATAAGTTACTGATTCAGGTTCTCGACGACTCGGATGATCCAATAACCGTATTGCTGATCCAAGAGGAGGTTCGTAAATGGCAGCAACTCGATGCCAACATCGTGTACCGACATAGGGTGATTCGAGAGGGGTATAAGGCAGGCAATCTCAAGTCTGCCATGAGTTGCAGCTATGTGAAAGACTATGAATTTGTTGCTATCTTTGATGCTGATTTTCAGCCTGCCTCTGATTTCCTTAAAAGAACACTTCCTCATTTTAAGGATAATGAGGAACTTGGACTCGTTCAAGCGCGGTGGTCGTTCGTAAACAAGGACGAGAACTTGTTAACCCGACTGCAGAACATTAACTTAGCCTTTCATTTCGAGGTGGAGCAACAGGTTAATGGAGTTTTTCTTAATTTCTTTGGATTCAATGGCACGGCTGGTGTTTGGAGGATTAAGGCTCTTGAAGAAGCCGGTGGATGGCTGGAAAGAACCACGGTTGAGGACATGGACATTGCGGTTCGTGCTCATCTTCATGGCTGGAAATTCATATTCCTCAACGATGTAGAGTGCCAATGTGAATTACCCGAATCGTATGAAGCGTATAGAAAACAACAGCACCGATGGCATTCTGGACCGATGCAATTGTTTCGTCTTTGTTTGCCTGATATCGTTCGATCAAAGATTGGCATATGGAAGAAATTCAACTTGATCTTCCTGTTCTTTCTGCTACGAAAGCTGATATTACCGTTTTATTCGTTTACACTTTTCTGCATTATTCTTCCGATGACGATGTTCGTTCCCGAAGCCGTGTTACCTGCGTGGGTCGTATGTTACATTCCAGCCACCATGTCTTTTCTCAACATTCTTCCAGCACCAAAGTTCTTCCCTTTCATTGTCCCTTACCTCCTTTTCGAGAACACAATGTCGGTAACAAAGTTCAATGCAATGGTTTCGGGACTTTTTCAACTCGGCAGTGCATACGAATGGGTCGTTACGAAGAAATCAGGTCGATCCTCCGAGGGTGATCTCGTCTCGATGGTCGGGAAAAAAGAGTTGAACACTGAAAAGAGTGCATCAGCTAACAACCTTGAGGAGATTGAGTTAATACAAAAACAGGACAAGAATTTGTCGAAGAAGAAGCATAATAGAATATACATGAAGGAACTAGCATTGGCTTTCCTTCTCCTAACAGCCTCAGCTAGAAGCCTTCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGATGTTTCAAGGAATATCCTTTCTCCTCGTCGGTCTCGACTTGATCGGCGAGCAGGTTGTTTGA 2109 44.43 MANWWRKESHKGTPVVVKMENPNWSMVELQGPSDDDFIIAAESPPGRIREKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVNIGAAVKRRVASGKTDADLDNDNDNADSGERENPTVKTRFYLFIKIFLWVSVGLLGFEVAAYYKGWHFRAPHLELNYFWAYPFGVKDVFDWIYSKWVVIRVDYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPNASAFDLESGETGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITVLLIQEEVRKWQQLDANIVYRHRVIREGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPASDFLKRTLPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLVSMVGKKELNTEKSASANNLEEIELIQKQDKNLSKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLMFQGISFLLVGLDLIGEQVV 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3712275 3714709 - Carg16378-RA Car12g00556 158172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00556 702 Pfam Glycosyl transferase family group 2 338 543 IPR001173 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00263 Car12g00556 CCT
Car01g01374 Car12g00556 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00556 Car-Chr12:3712275 Car15g00304 Car-Chr15:1646301 0 dispersed
Car01g01374 Car-Chr1:12066696 Car12g00556 Car-Chr12:3712275 0 wgd
Car12g00556 Car-Chr12:3712275 Car09g00263 Car-Chr9:1438177 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00556 - - csv:101203245 1266.52