Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00585 ACTGACTCCCTCTCTTCAACGCTATCGTCTTCTCCTCCACACTCTCTTGCTTCCTGGTTTCTTCATTTCTCCTGCTTCCGAATCCCTGTGTTTCTCCTTTCACCTCCATTTCTCTCCCATGGTGAGCAACTAGTTGCCAACATTCCTGCAATGTTGAAGGTTTCCTCCTCATCTGACTGCATTTCCATCTTCATCTCTCTTCTTCTCCTCTCACTTCCTTCTACCGCTCTCGCCCTCTCCGACGCGGATCACCTGGTTCTCGCTAACGCTACTCTCCAGTCTAGTAATGTATCCAGTCCGAGGAATAAGGAGGGTAGTTTTGCTGACATAATTGATCGTGCTTTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAACTGATGCAGGAGGCTTCAACAACAGCGTAGCGGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATGGAGCTGAAGACACTCCTACGTTGATTGATCGGAAGGACAATGTCTTTATCATATCCAACTTCAAGTCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGGCCTGGAGGATTTAATTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTGGCACAATTTGGTGTAGTTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCAGTCCTTGGTGGCCTGCTCCAAATTATCCTATTTATGTGCCTCAGTGGGATCATAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCATTTCTATCAATGTCCTCAACGGCAGTGGTGCTGAAATTTTTGATGGAAAAGAATTCGACAAATGCTCTTCATGGACAAGTCACGATTGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTTTTTGCTTTGCTTCCAGTGCTGGGTGGGAATTCTGGTATTCTTCAGGGAGTGATATCCATGAGTAAAGTGTAA 1167 44.99 TDSLSSTLSSSPPHSLASWFLHFSCFRIPVFLLSPPFLSHGEQLVANIPAMLKVSSSSDCISIFISLLLLSLPSTALALSDADHLVLANATLQSSNVSSPRNKEGSFADIIDRALENEFKENDQNEATDAGGFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNGAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVVFLLFALGLEFSTTKLRVVRAVAVLGGLLQIILFMCLSGIIASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKV 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3902291 3908894 - Carg23962-RA Car12g00585 158201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00585 388 Pfam Sodium/hydrogen exchanger family 213 375 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00640 Car12g00585 CCT
Car11g00567 Car12g00585 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00585 Car-Chr12:3902291 Car18g01106 Car-Chr18:11067665 2.80E-128 dispersed
Car12g00585 Car-Chr12:3902291 Car05g00083 Car-Chr5:425102 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00585 - - csv:101217282 549.28