Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00608 ATGAAGAGGATTCCAGAGTCAAAAACACTTCCATTATTACTGCCCATAGAGATGCTTCCAGAATCAAAGGTTCTTCCGGGAAATTTGTGTGTTTTGGATGATATACCAAAAGCACATGTGGCCTCAGCCAAGCAAGCTGGCCATTGGTCGAATATGCACTCAGCTAAGGTAAGAGACGTGGGAAGATCAATTGGACAAGGACTTCAAGATCCAGAAGTTTCTGCACCTATACGGATATCAAAGGGAAAATCCTCTTTCTTGGGTCAGGAAGAACCAAAGCGTGGTGTCACTTTAAAGGGTAGTAGATCTTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGGGCTAGCCACCCGCCAGAGCCCGTGGATATGGATCTAATGAGAACTGTTTATGTACCCATAGGACAAAATAAACCAGACCCCTGTTGCTTGATGAAGAGTTTTTCCGTGAATGGCCCCTTTCTTGAGGATCTTTCAATCCGGGTTCCAGCCAAGAAACCAAGCCCTGCTGCTCTCTCCCCTGCAGAAAGCTTAGTTGACGAGCCGCATGACTTGGGTGTTTTATCTACCCCCTTTTCAATTCCTCGTGCATCACAAATTACAGAAACCTCTCTCCTTCCCCCAGATTCTGAGGAGAAGGAATGTGTTTGGGATGCTTCTTTGCCCCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGATAGTAGCGGAGTTGTCACAGCTATGAGCATAGTTAATAGCTGTTCTAGTACATACCGAAGTGATGGAATGAGTATTGAAAGGAACTGTGAGAGTACTAAAGGAAGCATTAGAGGAGACTCTCTCGAGAGTGCAAAAACAAGTATTAGTCGAGCTAGTGATAGCAGTGGTCTCAGTGATGATAGTTGTTGGAGCAACATTACAGGAAGTGCTAATAAGCCCCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAACCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTACCTCTCAGAGCTAAGTGGGACTCGCTGTTTTTTTGCAATGAAAGTAATGGACAAGGCATCACTTGCTATAAGGAAGAAGTTAACGAGAGCTCAGACAGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACGTTGTACACCCATTTTGAAACCGACAGATTTTGCCTGTCTAGGGGAGACCTGCACACTTTGAGGCAACGGCAGCCAAGGAAACACTTCTCTGAGTATGCTGCGAGGTTTTATGCAGCAGAGGTTTTACTGGCCCTCGAGTATCTTCACATGCTGGGAGTTGTTTACAGAGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTTGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTAATAAAAACCTCACATGATTCTGACCCATCGAAACGAGCTGCATTCTGTGTCCAGCCTGCCTGTATCGAGCCATCATCAGCTTGCATCCAACCTGCATGCTTTATTCCACGACTCTTCCCTCAGAAAAGCAAAAAGAGAAGTCCCAAGCCTCGAAGCGAGCTAAGGTTGCAATCCAGTACTTTTCCTGAGCTGGTGGCAGAGCCGACTGCCGCCCGATCCATGTCTTTTGTTGGCACCCATGAATACCTAGCCCCTGAAATCATTAAAGGAGAGGGACATGGAAGTGCTGTTGATTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTGTATGGAAAAACCCCATTCAAAGGATCAGGAAACAGAGCCACACTATTCAATGTCGTAGGGCAGCAACTGAAGTTCCCAGAGTCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTGCTAGTAAAGGAGCCACAACATCGGCTCGGAGTTAAGAGGGGAGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCTATGGATGCCGAACTGCCCAAGTTTGGGGTAGTTGACGCAACAGGCGTTAGCAGCAGCAGTAAGAGGATGGTTGGCACAGATGTTGTCAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA 2163 46.09 MKRIPESKTLPLLLPIEMLPESKVLPGNLCVLDDIPKAHVASAKQAGHWSNMHSAKVRDVGRSIGQGLQDPEVSAPIRISKGKSSFLGQEEPKRGVTLKGSRSLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDPCCLMKSFSVNGPFLEDLSIRVPAKKPSPAALSPAESLVDEPHDLGVLSTPFSIPRASQITETSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCSSTYRSDGMSIERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSCWSNITGSANKPHKGNDPRWKAILAIRARDGILGMNHFRLLKRLGCGDIGSVYLSELSGTRCFFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCLSRGDLHTLRQRQPRKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSHDSDPSKRAAFCVQPACIEPSSACIQPACFIPRLFPQKSKKRSPKPRSELRLQSSTFPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMDAELPKFGVVDATGVSSSSKRMVGTDVVKSGGQYLDFEFF 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4137217 4140895 + Carg17694-RA Car12g00608 158224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00608 720 ProSiteProfiles Protein kinase domain profile. 334 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car12g00608 720 MobiDBLite consensus disorder prediction 265 292 - -
Car12g00608 720 Pfam Protein kinase domain 557 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car12g00608 720 Pfam Protein kinase domain 335 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car12g00608 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Car12g00608 720 MobiDBLite consensus disorder prediction 83 119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00608 Car-Chr12:4137217 Car18g00579 Car-Chr18:6510796 0 dispersed
Car12g00608 Car-Chr12:4137217 Car06g00782 Car-Chr6:6022437 2.48E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89230 PF00069 Pkinase 4.20E-28 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00608 - - csv:101217551 1325.46