Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car12g00688 | ATGAAGGAAGACGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTGAAGATCAGCCGATCATTAAAAAGTCTCAATGCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCCACTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCCAGAAAACGTACTTCTGAAGCTCTGAAAGCATTCTTCAGTGATCCAAAAAATCGTCAAAAGCGGAGCATTGCAATGAAAGGAATAAAATTTTACTGTAAAAACTGTGGACGTGAGGGGCATCGAAGACACTATTGTCCAGAACTTAAGGGTGATTCAATCGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGAAGGACCTGTAAGAAGTCTAGGTTGAATGGTAAACCGATGAGCGCAACAATTCAGCGTCATTGCACGATATGTGGTGGTAAGGGTCACAGCAGTAGGAACTTTTCGAAGTCCGAGATGAGAAATTCAAATAAAGGTATACATTATCCCCAACATCAGAATCCTGGCAATGTGTTGAGCCTGAATTTGATCAAGGGAGATAGGATGACTAATGAAAGCAGCAGAGTGAGGCAGTATCGTTGTAGGATCTGCGAAGAAAATGGTCACAATCGGCGGAATTGTCCCAATATCGACACGAAAGTTAACCATACAACTCGTAGAAGAACATACAGCTGCAAACTATGTCATGAAAAAGGGCATAACAGTAGAACATGCCCAGTTATAAAGATGAACAATCTGCAGAAAAATCCTCCCGGCGCTGTAAACCAATGA | 873 | 41.92 | MKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEKGHNRRTCKKSRLNGKPMSATIQRHCTICGGKGHSSRNFSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRRNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNLQKNPPGAVNQ | 290 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 4763799 | 4768830 | + | Carg17614-RA | Car12g00688 | 158304 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car12g00688 | 290 | ProSiteProfiles | Zinc finger CCHC-type profile. | 227 | 243 | IPR001878 | GO:0003676|GO:0008270 | |
| Car12g00688 | 290 | ProSiteProfiles | Zinc finger CCHC-type profile. | 137 | 153 | IPR001878 | GO:0003676|GO:0008270 | |
| Car12g00688 | 290 | ProSiteProfiles | Zinc finger CCHC-type profile. | 111 | 126 | IPR001878 | GO:0003676|GO:0008270 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car12g00688 | Car-Chr12:4763799 | Car11g00300 | Car-Chr11:1641308 | 4.12E-07 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car12g00688 | - | - | csv:101211176 | 439.113 |