Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00721 ATGGGCATCGTGGACGGAGGCACTCAAACTCAGTCTGCAAATCCGAACATGGGAAGAGAAAAGCCGAAGGTGGTCGTGATTATGGGGCCGACTGGTTCTGGGAAGTCACGTCTCGCCATCGATTTGGCTTCTCACTTCCCCGTCGAGATCATCAACGCCGATTCTATGCAGGTTTATCGCGGCTTGGACGTTCTCACAAACAAAGTTCCTCCCCAAGACCAAAATGGAGTACCGCATCATCTTTTAGGTACAGTGAGTCCAGACGTTGAATTCACGGCTAAAGACTTTCGAGATTCTGCCATTCCTGTTATTGATGACATATTATCACGTGGATGCTTGCCAATGATAGTGGGTGGAACGAATTATTATATACAGGCTCTTTTTAGCCCACTTCTTCTGGATGATTCTGCTAAAAATATCGGCGGAAGTTGCTCCAGTTATCTTGGAGATGAGGAGATGGATATTGAGTTGGATGAGGGAAGAGATAGTTTGAAGTATGACCATAGCTATCTTAAAGAGATTGATCCAGTTTCGGCTGGTAGACTCCATCCGAATAACCACCGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGTGTTCTTCCCAGCACACTTTTTCAAGGGAAGGCTGCTGAGAGTTGGGGTCAAGCTGATAGTTTCAGATACGATTGCTGCTTGATATGTGTCGATGCTTCTATTCCACAAATTGATGGACATGTTGATTCTAGAGTTGATAGCATGTTGGCTGCTGGATTACTTGATGAGGTCTATGAAATTTACAATCCAAATGCGAACTATACTAGAGGATTGTGGCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGGTATTATGTACCTAACGGAAGATGCGACGAAGATAGCAATGAGCTTAGTCCAAAAAATTCAATGGAGTGTACTGAGATTTTGAAAGAGAATATGAGGTCCATCCTAAATTCAACAAGTGCTGGCGAATCCAGTTTGCTACTGAAAGAAGCCATAGATAATGTAAAGTTAAATACTAGAAGACTGGTTCGTCGTCAGCGGAGGCAGATAAAGAGACTGGAAACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGGAATATATAACAACAATCTTGCCTGAACCCATTATCTTGGAACTTCTGCTGTTTCAAATGCTAGGCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCGTTCCTTGAAGATTGTTGTTCAGCGACTGAGACAATGAACCCACAGAGTTCTGGGCAAACAATCAAAAAGGACTTGTGGACACAATATGTTTGCCAGGCTTGTGGGAACAGAGTACTAAGAGGAGCACATGAATGGGAACAACACAATCTAGGTCGCTCGCATCGAAAGCGAATGTATCGGCTTAAGAAGCGTGAAGGGTTGTCTTTCCTGCAACAGAAACTACCTCAAGAGTAA 1476 43.36 MGIVDGGTQTQSANPNMGREKPKVVVIMGPTGSGKSRLAIDLASHFPVEIINADSMQVYRGLDVLTNKVPPQDQNGVPHHLLGTVSPDVEFTAKDFRDSAIPVIDDILSRGCLPMIVGGTNYYIQALFSPLLLDDSAKNIGGSCSSYLGDEEMDIELDEGRDSLKYDHSYLKEIDPVSAGRLHPNNHRKINQYLSLYYRTGVLPSTLFQGKAAESWGQADSFRYDCCLICVDASIPQIDGHVDSRVDSMLAAGLLDEVYEIYNPNANYTRGLWQAIGVREFEEFLRYYVPNGRCDEDSNELSPKNSMECTEILKENMRSILNSTSAGESSLLLKEAIDNVKLNTRRLVRRQRRQIKRLETLFGWKIHYVDSTEYITTILPEPIILELLLFQMLGKVEDSWTAQVVEPAVQIIRSFLEDCCSATETMNPQSSGQTIKKDLWTQYVCQACGNRVLRGAHEWEQHNLGRSHRKRMYRLKKREGLSFLQQKLPQE 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6594687 6611461 + Carg26932-RA Car12g00721 158337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00721 491 Hamap tRNA dimethylallyltransferase [miaA]. 24 380 IPR018022 GO:0008033
Car12g00721 491 MobiDBLite consensus disorder prediction 1 17 - -
Car12g00721 491 MobiDBLite consensus disorder prediction 1 20 - -
Car12g00721 491 Pfam IPP transferase 57 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00721 Car-Chr12:6594687 Car08g00319 Car-Chr8:2039236 1.48E-25 dispersed
Car16g00384 Car-Chr16:2368342 Car12g00721 Car-Chr12:6594687 2.65E-24 dispersed
Car12g00721 Car-Chr12:6594687 Car17g01097 Car-Chr17:8500266 3.50E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00721 K00791 - csv:101202758 771.926