Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00738 ATGGGTGTGGTTGAAGAGTACTTGCCAGCAATGGCGATGTTGGGAATTCAAGCAATTTATGCCATTGTCACACTCATCTCTAGGGCTGCCCTGTTGGAGGGTATGAGTCCTAGAGTGTTCATCGTTTATAGGCAGGCCTTTGCCACTCTATCCATAGCACCCGTTGCTTATCTCTCCAGGTCGAAATCCATGAAGGTGTCTTTGGACCTCAAGAGCTTTTATCTCATCTTTTTTGCTGCACTTATCGGTTCAACCATGAACCACAATTTTTTCTACGAGGGACTGTTCTTAGCCAGTTCATCATTAGCAACCGCGATGGAGAATCTGATTCCGGCAGTGACATTTATAATAGCAGCAATGGTCGGAATGGAGAGCGTGAACATGACAAACATGAGGTGCGTGGCCAAGATGGTAGGCACAGTGGTTTGTGTCGGTGGGGCTATGTTCATGGCCCTTCTAAGAGGTCCAAAGCTTCTGAACGCCACACAAGCTTCCGGTGTCAAATCTGCAATATTTGGTGTGGAAAGTGGAACGGATCAGGCTTGGTTGCTAGGCTCACTCAGTCTATTTGGGAGCTGCTGCTGTTGGTCAATTTGGTTGATATTGCAGGTGCCAGCAATGGCAAGCTATCCTGACAAGCTATCCTTATCAGCATGGACCTGTTTTTTTTCACTCATACAATCAGTGGCTTTCACATTATGGGTAGAGGGAGCCAATTTAGAAACGTGGAAGATTCATTCAACTACTGAACTTATTTGTTACCTCTTCTCAGGGATTTTTGGGTCAGGAGTTGCCTACTTTCTTCAAGCTTGGGGTATTTCAAAGAGAGGACCTGTGTTCTCTGCAGTGTTCAACCCCTTTTGCACCATTATTACCACTATTTTGGCAGCTATATTTCTTCATGAGGAGATTTATACTGGAAGCTTGTTGGGGGGCATGATTGTAATTATTGGATTATATGTGGTTCTTTGGGGGAAAACAAATGATTACACGAAGGAAGAAGACAGAGGAAAGTGTAGAGTTGAAAAACAAGAAGAGGATTGTGAATCAGCTTCAACTTCGATTGAGACAGATAGCTATAAAGTTGATGTGAGGGAACCCCTTTTGTCTGGGTCACATCATATTGACAACTAG 1134 44.18 MGVVEEYLPAMAMLGIQAIYAIVTLISRAALLEGMSPRVFIVYRQAFATLSIAPVAYLSRSKSMKVSLDLKSFYLIFFAALIGSTMNHNFFYEGLFLASSSLATAMENLIPAVTFIIAAMVGMESVNMTNMRCVAKMVGTVVCVGGAMFMALLRGPKLLNATQASGVKSAIFGVESGTDQAWLLGSLSLFGSCCCWSIWLILQVPAMASYPDKLSLSAWTCFFSLIQSVAFTLWVEGANLETWKIHSTTELICYLFSGIFGSGVAYFLQAWGISKRGPVFSAVFNPFCTIITTILAAIFLHEEIYTGSLLGGMIVIIGLYVVLWGKTNDYTKEEDRGKCRVEKQEEDCESASTSIETDSYKVDVREPLLSGSHHIDN 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7112968 7116147 + Carg16406-RA Car12g00738 158354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00738 377 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Car12g00738 377 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00738 Car-Chr12:7112968 Car05g00227 Car-Chr5:1189261 6.44E-68 dispersed
Car12g00738 Car-Chr12:7112968 Car12g00739 Car-Chr12:7149160 0 tandem
Car05g00607 Car-Chr5:3581753 Car12g00738 Car-Chr12:7112968 0 transposed
Car12g00738 Car-Chr12:7112968 Car02g00885 Car-Chr2:6290061 1.90E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00738 - - cmax:111468623 695.656