Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00739 ATGGGTGTGGTTGAAGAGTACTTGCCAGCCATAGCCATGTTGGGGCTCCAAGCAATTTATGCCGTTGTGACACTCATCTCCAGGGCTGCCCTGTTGGAGGGCATGAGTCCTAGAGTGTTCATCGTGTACAGGCAGGCCTTTGCCACTCTCTCTATAGCACCTGTTGCTTACTTCTCCAGCTCCAAATCCATGAAGCTTTCTTTGGATTTCAAGAGCTTTTGTCTCATCTTCCTTGATGCTCTTGCTGGGACGACGATCAACCTCAATTTTTTCTACGAGGGGCTTTTCTTAGCTAGCTCGTCGTTGGCTACCGCGATGGAGAATCTAATTCCAGCAATGACATTTCTCATAGCCGGGATGGTCGGTATGGAGAGTGTGAAGATGAAAAATTTGAGGAGCATGGCTAAGATTGGAGGGACAGTGGTTTGTATGGGTGGGGCTATGTTCATGGCCTTTCTAAGGGGACCAAAGCTGCTGAATGCCACACAAGGGTTTGGTGTCAAATCTGCAATATTTGATGTGGAAAGTGGGAGCCATGAGGCTTGGTTGTTGGGGTCACTCAGTCTGCTTGGGAGCTGTGTCTGTTGGTCAATTTGGTTGATATTGCAGGTGCCGGCAATGGAGAGCTATCCTGACAAGCTATCCTTATCAGCATGGACTTGTTTTTTTTCACTCATACAATCAGTGGCTTTCACATTATGGGTGGAGGGAGCCAATGTAGAAACGTGGAAGATTCATTCGAATACTGAACTTGTTTGTTACCTGTTCTCGGGGATTTTTGGGTCAGGAGTTGCGTACTATCTTCAAGCTTGGGGTATTTCAAAGAGGGGACCTGTGTTCTCTGCCGTGTTCATCCCGTTTTGCACCATTATTACAACTGTTTTGGCAGCTATATTTCTTCATGAGGAGATTTATAGTGGAAGCTTGTTGGGGGGCGTCGTGGTAATTATCGGATTGTACGTATTTCTTTGGGGAAAAGCCAATGAAGGTGTGAAGGAAGAAGACAAAGAAAGGAGTAGAATTGAAAAACAAGAGGATTGTGAATCAAATTCAGTGGACAAGGAGAGTTACAAAATTGATATGGAAGAACCTCTATTGAAGGGATGTACAGATCATATTGACAACTAG 1128 45.3 MGVVEEYLPAIAMLGLQAIYAVVTLISRAALLEGMSPRVFIVYRQAFATLSIAPVAYFSSSKSMKLSLDFKSFCLIFLDALAGTTINLNFFYEGLFLASSSLATAMENLIPAMTFLIAGMVGMESVKMKNLRSMAKIGGTVVCMGGAMFMAFLRGPKLLNATQGFGVKSAIFDVESGSHEAWLLGSLSLLGSCVCWSIWLILQVPAMESYPDKLSLSAWTCFFSLIQSVAFTLWVEGANVETWKIHSNTELVCYLFSGIFGSGVAYYLQAWGISKRGPVFSAVFIPFCTIITTVLAAIFLHEEIYSGSLLGGVVVIIGLYVFLWGKANEGVKEEDKERSRIEKQEDCESNSVDKESYKIDMEEPLLKGCTDHIDN 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7149160 7151692 + Carg16407-RA Car12g00739 158355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00739 375 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00607 Car-Chr5:3581753 Car12g00739 Car-Chr12:7149160 2.26E-179 dispersed
Car12g00739 Car-Chr12:7149160 Car04g02357 Car-Chr4:18947473 9.57E-72 dispersed
Car12g00738 Car-Chr12:7112968 Car12g00739 Car-Chr12:7149160 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00739 - - cmax:111468623 611.683