Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00864 ATGGTGGGGAATTTCCAGCCCACGGTTCTTGTGTTTTTGGCGATTCTTGTTGTTGGGAAGGCGGAAATTTACATTGTCACCATTGATGGAGAACCTATTGTGAGTTACAAAGGTGATCTTGATGGATTTGAGGCCACTGCTGTGGAATCTGATGAAAAGATCGACTCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTTGACATCTCGCACGAGCAGGCAGAGACTCTAAGACACACGCCAATTGTAAAATCTGTGGAGAGGGACTGGAAGGTTAGGAAACTAACAACACACACACCGGAGTTTTTGGGTCTTCCAACAGGCGTATGGCCAACCGGCGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATATATCCACACCATCCAAGTTTTGCTACCTATAATACCGAACCTTTCGGGCCATGTTCGAAGTATAAAGGGAAATGTGAAGTTGACCCCAACACCAAGAAGAGTTTTTGTAATGGAAAGATTGTTGGAGCTCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCTTCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACTGCAGCAATTGCAGCTGGAAACAATGGAATCCCTGTGAGACTGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATACAAAGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTGGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTGAGTCTTTCGGTGGGGCCAAATAGTCCTCCTGCAACTACAAAGATCACATATTTAAACCCTTTTGATGCTACCCTTCTTTCCGCTGTGAAAGCTGGTGTCTTTGTTGCGCAAGCTGCTGGAAATGGAGGTCCATTTCCTAAAACATTGGTGTCCTATAGTCCATGGATAGCCACTGTGGCTGCTGCCATTGATGACAGAAGATACAAAAACCATCTCACACTTGGTAATGGAAAAATCTTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAACCGAACGTACACATTGGTCGCAGCTAACGACGTTCTGTTAGATTCATCAGTAAGGAAGTCCAGCCCCTCTGACTGCCAAAGACCAGAAGTTCTAAACAAACGACTGGTTGAAGGGAAGGTTCTTCTTTGTGGCTATTCATTCAGTTTTGTTGTGGGTACTGCTTCAATCAAGAAGGTCGCTCAAACTGCAAAAGCCCTTGGTGCTGCTGGCTTTGTTCTTGCTGTTGAAAACGTCTCTCCTGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGAATTCTTTTAACTGATGTCACCAAGTCAATGGTCATTTTAGTGCATCCCGCTCTTCGAAAATACTTAGATTTCGTCCTGCATATTGGAATATCAATAGTATAG 1566 44.38 MVGNFQPTVLVFLAILVVGKAEIYIVTIDGEPIVSYKGDLDGFEATAVESDEKIDSTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDISHEQAETLRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPNTKKSFCNGKIVGAQHFAEAAKAAGAFNPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRLHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVRKSSPSDCQRPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVAQTAKALGAAGFVLAVENVSPGAKFDPVPVGIPGILLTDVTKSMVILVHPALRKYLDFVLHIGISIV 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8417233 8423802 - Carg24198-RA Car12g00864 158480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00864 521 Pfam Subtilase family 153 352 IPR000209 GO:0006508|GO:0008236
Car12g00864 521 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Car12g00864 521 ProSiteProfiles Serine proteases, subtilase domain profile. 122 521 - -
Car12g00864 521 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00664 Car12g00864 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00037 Car-Chr7:256504 Car12g00864 Car-Chr12:8417233 5.25E-136 dispersed
Car12g00864 Car-Chr12:8417233 Car10g00692 Car-Chr10:3589429 2.93E-59 dispersed
Car16g00492 Car-Chr16:3151263 Car12g00864 Car-Chr12:8417233 6.36E-08 transposed
Car12g00864 Car-Chr12:8417233 Car05g00664 Car-Chr5:4131628 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00864 - - csv:101219351 944.88