Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00910 ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAGCTCCAGTTCATCACAGCCATTACCAGATTCCAATTCCGTTCATCGATCCATCATTTCTCTGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGGAATCACCGTCGCCGGTCGCCCATGGCCGCCTCCGCCGCTGGTAACCCTTCATCCTCCTCTTCGTCCTCCTCCAACCCTTTCATTTTCTCCCCCGATTCTCCCCCTAGACTCGCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAAGGAGAAGCTCCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCCAGAGAATAACCGCATCGGATATGAAGAAAAATTGCTCTGTGGCTCTTGACAATGTCAACATCAGTAAGAATCGTTACACCGATGTATTACCCTTTGACGAGACTAGAGTCGTGCTCGACTCTTGTAAGGATTACAGACCTTCTGCAAAGGGTTATATCAATGCAAGCCTTATTTCCAGTTCCTCCTCAGAAAGCCTTTCTAAGTTTATTGCCACACAAGGTCCGTTACCACACACTTATGAGGATTTCTGGGAGATGGTATTGCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTCATTGATAATTACAAGACGGTGAAGTGTGGAGATTACTTTCCAGCTGAAGATGGTAGTAGAGATTTTGGTAATCTAGTGGTAGTCTCCAAATGGATAAAATCTTCCAATTCCTCTCTTATACTGCGCCATTTGGAAGTGAACCATAAAGAGTCAGAAGAACGTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCCGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCATTTACCACCCGATCTCGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACTGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTATTGGAGACTTGTCTGCTTTAGATCTTGTCAGTACCATTTTTACATTTAGATCCCAGCGAATTGGAATGGTTCAAACACTGGTCATTATATGCACGATAACGATCAATACTTTTTCTGCTATAGAACCATCGTTGATGAACTACAAGACCTTATATCTGTCCCACAGTAGAGGCTCGAAGCGACGGATTAATGACCGACCGTATGCGGGGTTGGGATCTTGCTTAATAAAGAGCTTGCTGGATTTGATCTTCTCAGCGTTGATGAAATCAGCAGCTGTGGTTCCAGGAGGTTCGTTTTCTCGAGCAGCCGAGTATGAACACTGTTCATTGTGGTCACAGTGA 1371 45.51 MIKQAHSLIQIPNELQFITAITRFQFRSSIHHFSAFQIRPLGNLTSTRSRNHRRRSPMAASAAGNPSSSSSSSSNPFIFSPDSPPRLALTPHQIKLCSEALEAFKEKLQMPDVINQEFARLQAQRITASDMKKNCSVALDNVNISKNRYTDVLPFDETRVVLDSCKDYRPSAKGYINASLISSSSSESLSKFIATQGPLPHTYEDFWEMVLQYKCPAILMLTRLIDNYKTVKCGDYFPAEDGSRDFGNLVVVSKWIKSSNSSLILRHLEVNHKESEERVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDLSALDLVSTIFTFRSQRIGMVQTLVIICTITINTFSAIEPSLMNYKTLYLSHSRGSKRRINDRPYAGLGSCLIKSLLDLIFSALMKSAAVVPGGSFSRAAEYEHCSLWSQ 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9033515 9045358 - Carg22645-RA Car12g00910 158526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00910 456 ProSitePatterns Tyrosine specific protein phosphatases active site. 320 330 IPR016130 GO:0016311|GO:0016791
Car12g00910 456 Pfam Protein-tyrosine phosphatase 143 370 IPR000242 GO:0004725|GO:0006470
Car12g00910 456 MobiDBLite consensus disorder prediction 44 77 - -
Car12g00910 456 ProSiteProfiles PTP type protein phosphatase domain profile. 114 369 IPR000242 GO:0004725|GO:0006470
Car12g00910 456 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 299 369 IPR000387 GO:0016311|GO:0016791
Car12g00910 456 MobiDBLite consensus disorder prediction 61 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00530 Car-Chr6:2982531 Car12g00910 Car-Chr12:9033515 2.64E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00910 - - bhj:120086129 619.772