Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00985 ATGTGTTGCGACGGCGAAGGGCTCCTTTTGGTCCAAAAGGTCTCAGAACTTTACCACAAAATCTCCACTCTCCAAAGCCTCCAACCCTCCAAACATGTCAACTCCCTCTTCTCTCAGCTCGTCCTCACCTGCACCCCTCCGCCGCCTCCTCCACCGTCTCCGCCGCTCATCGACATCTCCAAGCTCAGCTCGACCGTCCAAACCATGAGATCCCATCTCATCAAGCTCTGCGGCCAAGCCGAGGGCTTACTCGAGCACCATTACTCGACCATCTTAGCCTCCCACCAGAACCCTCTTGACCATCTCTCCCTTTTCCCTTACTACTCCAACTACCTCAAACTAACCCATCTCGAATTCTCCATTCTGACCCGTTACATATCATCCTCTCCACCGTCCAAAGTGGCATTCATTGGCTCTGGTGCTCTCCCGTTCTCGTCCATCATCATGGCTTTGAAATACCTCCCGACGACTGAGTTTCACAACTTTGATGTCGACTCATCTGCTAATGCCAAGGCTACGACGCTCGTAGCAAGCGACGTGGACTTGTCGAAGCGGATGTTGTTCCACACTACTGATATCATGGACGTCACCTCGAACATGTTGGGAGAGTTCGAGGTGGTGTTTTTGGCAGCGTTGGTGGGAATGGAGAAAGAGGAGAAAGTTAAGGTAATCGAGCATTTACGAAAGAACATGACTAGTGGCTCGTTGTTGATGTTGAGAAGCGCGTATGGTGCACGTGCATTTCTTTATCCAGTGGTGGAAGCTTCTGATCTTCGAGGGTTTGAGATTCTTACAACGTTTCATCCGACTGATGATGTTGTCAATTCGATCGTGTTGGCTCGATTATAA 849 50.29 MCCDGEGLLLVQKVSELYHKISTLQSLQPSKHVNSLFSQLVLTCTPPPPPPPSPPLIDISKLSSTVQTMRSHLIKLCGQAEGLLEHHYSTILASHQNPLDHLSLFPYYSNYLKLTHLEFSILTRYISSSPPSKVAFIGSGALPFSSIIMALKYLPTTEFHNFDVDSSANAKATTLVASDVDLSKRMLFHTTDIMDVTSNMLGEFEVVFLAALVGMEKEEKVKVIEHLRKNMTSGSLLMLRSAYGARAFLYPVVEASDLRGFEILTTFHPTDDVVNSIVLARL 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9913211 9914059 - Carg23258-RA Car12g00985 158601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00985 282 Pfam Nicotianamine synthase protein 9 281 IPR004298 GO:0030410|GO:0030418
Car12g00985 282 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 2 282 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01035 Car12g00985 CCT
Car05g00944 Car12g00985 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01035 Car-Chr11:7784098 Car12g00985 Car-Chr12:9913211 2.29E-108 dispersed
Car10g00382 Car-Chr10:1902024 Car12g00985 Car-Chr12:9913211 2.34E-93 transposed
Car12g00985 Car-Chr12:9913211 Car05g00944 Car-Chr5:9107871 6.67E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00985 K05953 - csv:101219339 430.254