Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g00993 ATGGGTGGCTTGAGTGAGGGTCTAATACAGGTGTTGATACCTGCAGCTGCCTTGCTTGGTATTGGATTTGCCTTTCTTCAATGGGTTTTGGTATCAAGGGTTAAGGTTTCTGGGTATGCTGATGATGAAAGCCAGGAGAACAATTTGATTGAATCTGGACATGAGGAAGGAGCAACCTCATTTTTATTCACCCAGTACAAGTACCTTGTTGTGTTCATGGGAGCATTTGGAGCCGTCATTTTTCTGTTCCTTGGCTCAGTCAAGAGCTTCAGCACCAAAAGTGAACCTTGCACATACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATCTTCAGCACAATTGCCTTCTTCCTAGGTGCTCTCACCTCGGTTCTATCCGGTTTCCTTGGAATGAAGATAGCAACTTATGCAAACGCTCGAACGAGCCTAGAAGCACGAAAAGGCATCGGAAAAGCATTCACTATCGCCTTTCGTTCCGGTGCTGTCATGGGATTCCTTCTAGCTGCCAATGGCCTCCTTGTGTTATATGCCTCCATCAATTTGTTTAAGCTGTATTATGGCGATGATTGGGAAGGATTGTACGAGTCTATCACCGGGTACGGTCTTGGAGGTTCTTCAATGGCGTTGTTTGGACGTGTTGGGGAATCAACCTGTGCTGCACTTTTCGTAGCGTCGATATCGTCGTTCGGCTTCACACATAACTACGCAGCCATGTCCTACCCTCTACTTATAAGCTCAATGGGCATTGTGATTTGCTTAATAACTACACTTTTTGCAACCGATCTCGTTGAGGTTAAGAAAGTAAGTGAAATCGAACCGTCGTTAAAACGACAACTTCTCATCTCCACCGTGCTGATGACAGCCGGAGCAGCTCTGGTCAGCTTTGTCGCTTTACCTTCGAAGTTCACACTCTATGACTTCGGCAACGACAAGGTCGTTAAGAACTGGCACCTTTTCTTCTGTGTTGTGACAGGATTATGGGCAGGACTTGTTATTGGATATACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTACAGGATGTGGCTGATTCTTGTAGAACAGGAGCTGCAACAAATGTAATATTCGGATTAGCTCTTGGATACAAATCCGTCATCGTTCCCATATTTTCGATCGCCTTATCGATTTACGTGAGCTTCCGCTTGGCAGCCATGTACGGTATCGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGACCTATAAGTGACAATGCAGGTGGAATAGCTGAAATGGCTGGAATGAGCCACGAGGTTCGTGAGAGAACGGATGCTTTAGATGCTGCAGGCAACACGACCGCAGCCATAGGAAAGGGCTTTGCCATTGGATCAGCAGCTCTTGTTTCCCTCGCCTTGTTCGGCGCCTTTGTGAGCCGAGCAGGCATCGAAACCGTCAATGTTATGAACCCGAAAGTCTTCATTGGATTGATAGTAGGTGCAATGCTTCCATATTGGTTTTCAGCCATGACAATGAAGAGCGTTGGCAGCGCAGCGTTGAAGATGGTTGAGGAAGTTCGACGACAATTCAACTCGATCCCGGGGCTGATGGAAGGCAGGACAAAGCCAGACTATGCAAATTGTGTCAAGATATCGACCGACGCGTCGCTTCGAGAGATGATCCCTCCTGGTGCTTTGGTTTTGGTTACACCACTCATTGCTGGAACATTCTTTGGTGTTGAGACTCTTGCTGGTCTTCTGGCTGGTTCCCTTGTCTCTGGCGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATTGAGGCGGGAGCAAGTGAGCATGCTAAAGCCCTTGGTCCCAAAGGGTCAGAGGCTCACAAGGCAGCTGTGATAGGTGACACAGTTGGGGACCCTCTCAAGGACACTTCTGGTCCCTCACTTAACATTCTCATCAAGCTCATGGCTGTTGAGGCTTTGGTTTTTGCCCCATTCTTTGCTGCACATGGTGGCCTCATCTTCAAGCATATATAA 2052 47.42 MGGLSEGLIQVLIPAAALLGIGFAFLQWVLVSRVKVSGYADDESQENNLIESGHEEGATSFLFTQYKYLVVFMGAFGAVIFLFLGSVKSFSTKSEPCTYNKGQMCKPALANAIFSTIAFFLGALTSVLSGFLGMKIATYANARTSLEARKGIGKAFTIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGESTCAALFVASISSFGFTHNYAAMSYPLLISSMGIVICLITTLFATDLVEVKKVSEIEPSLKRQLLISTVLMTAGAALVSFVALPSKFTLYDFGNDKVVKNWHLFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIVPIFSIALSIYVSFRLAAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEVRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIETVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVKISTDASLREMIPPGALVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGASEHAKALGPKGSEAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVEALVFAPFFAAHGGLIFKHI 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9955228 9962491 + Carg23266-RA Car12g00993 158609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g00993 683 Pfam Inorganic H+ pyrophosphatase 38 217 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Car12g00993 683 Pfam Inorganic H+ pyrophosphatase 219 668 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00472 Car-Chr10:2361594 Car12g00993 Car-Chr12:9955228 0 dispersed
Car12g00993 Car-Chr12:9955228 Car17g00585 Car-Chr17:5581760 7.69E-10 dispersed
Car12g00993 Car-Chr12:9955228 Car11g00393 Car-Chr11:2159840 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g00993 K23025 - csv:101205277 1184.09