Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g01026 ATGAGAATGTGGGAGGCCTCACCCTGGTCCCTGCTGTGCGTTCTTACAGGGCTGTACGCGCTTGTGTTGGTTGCAAGAATACGAAGAAAACGAAAGGCGAGGGCATACAGGTTTCCTCCAGGGAGGAGAAGCTGGCCTCTAATAGGCGATAGCTTGCAGTGGTACAGTGCGGTGGCAAGCTCTCATCCGCCCAAGTATGTTGAAGAACAGGCCAAAAGGTACGGGAAGATCTTCTCGTGCCGTGTGTTCGGGAAATGGGCAGTGGTGTCGGTGGATCCCGTGTTTAACCGATACGTTATGCAAAACGAAGGCAAGTTGTTCAAATCCAGCTACCCCAAATCTTTCAGAGATTTGGTAGGGACCAACGGTGTGATCACAGCACAAGGGGAACAACAAAGGAAACTCCATGCAATGGCCTCCAATATGATGCGCCTACATGACCTCAAATTTCAGTTCCTGCGAGATATTCAAATCATAATCATTCAAACCTTGGGCAGTTTCCATAACGGCCAACTCATATGTCTCCAAGACATAGCCATTAATCTAATAGTAAGTCAGGTACTAGGAGTGTCGAGTGAATCAGAAGTGGATGAAATTAGTGGGTTATTTTACGACTTCGTGGATGGCTGTTTGTCTATTCCTATCAACTTTCCTGGCTTTGCCTATTACGGGGCGATGAAGGCGAGGGAGCAAATGATAGGCAAAATAAAGAAGAAAATAGCGTGGCATAAGGCGAGGATGGCAGAGGGAAGGGGCGGGGAGGGAATGTTGGGAGGAGTATTGGAGGAGCAGAAGTTGTCGGATGAGGCAGTTGCTGATTTCATTATCAATCTTCTTTTTGCTGGGAATGAAACCACATCTAAAACAATGCTTTTTGCAGTCTATTTCCTAACCCACTCACCCACAGCAATGAAGCAACTTGTGGATGAGCAACAGGGTTTAACAAACAAGAATGGGGATCATACAATCACATGGCAGGATTACAAATCGATGCCCTTTACTCAATGTGTTATTGACGAGACACTTCGACTCGGAGGAATTGCAATATGGTTGATGAGGGAGGCAAAAGAAGAGATCGAGTATTCAGATTACGTTATTCCAAAAGGATGTTTCGTTGTTCCATTTCTTTCTGCTGTACATTTGGACGAGACTATATATCGAGAAGCTTCAACTTTCAACCCTTGGAGATGGATGGAGCTTAAGAATCAGGAAATGAGAAACTGGAGGAGTAGCCCATTCTTTGCTCCATTCGGGGGAGGTGCTAGATTATGTCCTGGAGCAGAATTGGCCCGCCTCCAAATTGCTCTATTTCTCCACCACTTTGTTACCAAGTATAGTCAACGGCTTCCAAATTCGCTTGAACACATTCCAACACTGACATCTGACTTTCAAATGAATGAAGCACCCATCAATGTTTCTTCCTTCGTCTTCTACTTTACTTATTTCTCGCCTAAATGA 1458 45.34 MRMWEASPWSLLCVLTGLYALVLVARIRRKRKARAYRFPPGRRSWPLIGDSLQWYSAVASSHPPKYVEEQAKRYGKIFSCRVFGKWAVVSVDPVFNRYVMQNEGKLFKSSYPKSFRDLVGTNGVITAQGEQQRKLHAMASNMMRLHDLKFQFLRDIQIIIIQTLGSFHNGQLICLQDIAINLIVSQVLGVSSESEVDEISGLFYDFVDGCLSIPINFPGFAYYGAMKAREQMIGKIKKKIAWHKARMAEGRGGEGMLGGVLEEQKLSDEAVADFIINLLFAGNETTSKTMLFAVYFLTHSPTAMKQLVDEQQGLTNKNGDHTITWQDYKSMPFTQCVIDETLRLGGIAIWLMREAKEEIEYSDYVIPKGCFVVPFLSAVHLDETIYREASTFNPWRWMELKNQEMRNWRSSPFFAPFGGGARLCPGAELARLQIALFLHHFVTKYSQRLPNSLEHIPTLTSDFQMNEAPINVSSFVFYFTYFSPK 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10169492 10171851 - Carg17528-RA Car12g01026 158642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g01026 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Car12g01026 485 Pfam Cytochrome P450 39 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g01026 Car-Chr12:10169492 Car04g02708 Car-Chr4:20966689 3.83E-71 dispersed
Car12g01026 Car-Chr12:10169492 Car15g00229 Car-Chr15:1281704 2.60E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g01026 - - mcha:111025171 678.322