Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car12g01114 | ATGGCTAACCGGTGGTGGACCTCCGCCCAGATGGGTCTTCCCGGAGTTGATCATACATCCACAACCTCCTCTGCCTTGAGAAAACCAGATCTCGGAATCTCCATGAACAACAACGGCGGTGGTGGCGGCGATGACGATGACGATAGAGACAACGGTGGTGACGATGAGCCTAAGGAAGGAGCTGTCGACGTTCCCTCTCGCCGCCCTCGTGGCCGTCCGCCCGGGTCCAAGAATAAGCCTAAGCCTCCTATCTTTGTTACTAGAGATAGCCCTAATGCACTAAAAAGCCATGTCATGGAGATTTCTAATGGCGCTGATATCGCTGAGTGTGTCGCTCAATTCTCCCGTCGTCGTCAGAAAGGTGTGTCTGTGCTTAGTGGTAGTGGGACGGTAACGAACGTGACCCTTCGACAACCGTCGGCCCCCGGTGCAGTCTTGACACTCCATGGTCGATTCGAGATCCTTTCGTTGACTGGAACTTTCCTCCCTGGACCAGCTCCGCCGGGCTCGGCGGGCCTAACGATCTACTTAGCTGGTGGTCAAGGGCAAGTGGTGGGTGGTAGTGTCGTCGGGCCACTCACTGCTGCCGGGCCGGTGATGGTGATAGCTGCGACGTTTTCCAACGCGACATACGAGCGATTACCGTTGGAAGAGGAGGAGGACGGCGGAGGAGGAGGAGGACAAGGGCTGGCATCAACCGGAGGTGGTGGTGGAGGGGATAGTTCACCACAAGGCATTGGTGGCGGAGTGGGAGATCCATCAGCTATGCCGCCGTTGTACAATTTACCGCCGAACTTGCTGCCGAATGGTGGCGGTGGGCAGATGAATCAGGAGGCTTATTCTTGGGCTCACGGCGGCCGGCCGCCGTTCAAAGGCGGTGGATAA | 885 | 57.4 | MANRWWTSAQMGLPGVDHTSTTSSALRKPDLGISMNNNGGGGGDDDDDRDNGGDDEPKEGAVDVPSRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAECVAQFSRRRQKGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSAGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEDGGGGGGQGLASTGGGGGGDSSPQGIGGGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPPFKGGG | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10848560 | 10849533 | + | Carg17436-RA | Car12g01114 | 158730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car12g01114 | 294 | MobiDBLite | consensus disorder prediction | 13 | 31 | - | - | |
Car12g01114 | 294 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
Car12g01114 | 294 | ProSiteProfiles | PPC domain profile profile. | 91 | 229 | IPR005175 | - | |
Car12g01114 | 294 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 96 | 208 | IPR005175 | - | |
Car12g01114 | 294 | MobiDBLite | consensus disorder prediction | 217 | 294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g01150 | Car-Chr6:8516857 | Car12g01114 | Car-Chr12:10848560 | 2.10E-79 | dispersed | |
Car12g01114 | Car-Chr12:10848560 | Car04g01075 | Car-Chr4:6193419 | 1.30E-78 | dispersed | |
Car12g01114 | Car-Chr12:10848560 | Car14g01614 | Car-Chr14:13016584 | 4.59E-82 | wgd | |
Car12g01114 | Car-Chr12:10848560 | Car05g01151 | Car-Chr5:10998556 | 5.68E-135 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car12g01114 | - | - | cpep:111799159 | 441.81 |