Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g01114 ATGGCTAACCGGTGGTGGACCTCCGCCCAGATGGGTCTTCCCGGAGTTGATCATACATCCACAACCTCCTCTGCCTTGAGAAAACCAGATCTCGGAATCTCCATGAACAACAACGGCGGTGGTGGCGGCGATGACGATGACGATAGAGACAACGGTGGTGACGATGAGCCTAAGGAAGGAGCTGTCGACGTTCCCTCTCGCCGCCCTCGTGGCCGTCCGCCCGGGTCCAAGAATAAGCCTAAGCCTCCTATCTTTGTTACTAGAGATAGCCCTAATGCACTAAAAAGCCATGTCATGGAGATTTCTAATGGCGCTGATATCGCTGAGTGTGTCGCTCAATTCTCCCGTCGTCGTCAGAAAGGTGTGTCTGTGCTTAGTGGTAGTGGGACGGTAACGAACGTGACCCTTCGACAACCGTCGGCCCCCGGTGCAGTCTTGACACTCCATGGTCGATTCGAGATCCTTTCGTTGACTGGAACTTTCCTCCCTGGACCAGCTCCGCCGGGCTCGGCGGGCCTAACGATCTACTTAGCTGGTGGTCAAGGGCAAGTGGTGGGTGGTAGTGTCGTCGGGCCACTCACTGCTGCCGGGCCGGTGATGGTGATAGCTGCGACGTTTTCCAACGCGACATACGAGCGATTACCGTTGGAAGAGGAGGAGGACGGCGGAGGAGGAGGAGGACAAGGGCTGGCATCAACCGGAGGTGGTGGTGGAGGGGATAGTTCACCACAAGGCATTGGTGGCGGAGTGGGAGATCCATCAGCTATGCCGCCGTTGTACAATTTACCGCCGAACTTGCTGCCGAATGGTGGCGGTGGGCAGATGAATCAGGAGGCTTATTCTTGGGCTCACGGCGGCCGGCCGCCGTTCAAAGGCGGTGGATAA 885 57.4 MANRWWTSAQMGLPGVDHTSTTSSALRKPDLGISMNNNGGGGGDDDDDRDNGGDDEPKEGAVDVPSRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAECVAQFSRRRQKGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSAGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEDGGGGGGQGLASTGGGGGGDSSPQGIGGGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPPFKGGG 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10848560 10849533 + Carg17436-RA Car12g01114 158730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g01114 294 MobiDBLite consensus disorder prediction 13 31 - -
Car12g01114 294 MobiDBLite consensus disorder prediction 1 91 - -
Car12g01114 294 ProSiteProfiles PPC domain profile profile. 91 229 IPR005175 -
Car12g01114 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 208 IPR005175 -
Car12g01114 294 MobiDBLite consensus disorder prediction 217 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01150 Car-Chr6:8516857 Car12g01114 Car-Chr12:10848560 2.10E-79 dispersed
Car12g01114 Car-Chr12:10848560 Car04g01075 Car-Chr4:6193419 1.30E-78 dispersed
Car12g01114 Car-Chr12:10848560 Car14g01614 Car-Chr14:13016584 4.59E-82 wgd
Car12g01114 Car-Chr12:10848560 Car05g01151 Car-Chr5:10998556 5.68E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g01114 - - cpep:111799159 441.81