Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car12g01124 ATTCATCCACGTACTCCCCTGTTTTCATCTCTTCAGTTTCTTCTTCTCTCTCAAAGAATCTCCCCCCAAATTCCTCAATTCCCCCAATCCCCGTTTCTTTTCTCATCATTTTCCATGGCGGGTAATGGCGTTTTTGCAGAGATTCTCGACGGGGAAGTTTACAAATTCTATTCCGAAGGTGAGTGGAAGAAATCCTCCTCCGGGAAGAGCGTCGCCATTATCAACCCCACTACGAGGAAGACGCAGTACAGAGTTCAAGCTTGTAACCAAGAGGAGGTTAATCAAGTGATGGAAATTGCCAAAACTGCTCAGAAATCATGGGCTAAGACTCCATTGTGGAAGAGAGCTGAGCTTCTTCATAAAGCAGCTGCAATTTTGAAAGAACATAAAGCACCCATTGCTGAGTGTTTGGTGAAGGAAATTGCAAAACCAGCTAAAGATGCAGTGACTGAGGTTGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGCTCTTGGGAGAAGGGAAGTTCTTGGTTTCTGATAGTTTTCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCACTTGGTGTGATCTTAGCCATTCCTCCATTTAACTATCCTGTCAATCTGGCTGTCTCGAAAATTGCACCGGCTTTGATTGCTGGAAATTCGATCGTCCTCAAGCCTCCAACTCAGGGTGCTGTTTCCGCTCTTCATATGGTGCATTGCTTCCATCTTGCTGGTTTTCCTAAAGGCCTTATTAGTTGTGTCACTGGTAAAGGTTCTGAAATTGGTGATTTCCTCACGATGCATCCTGGTGTAGACTGTATAAGCTTTACTGGTGGAGATACTGGTATTGCGATTTCAAAGAAGGCAGGCATGATACCTCTTCAAATGGAACTGGGAGGCAAAGACGCCTGCATCATTCTCGAGGATGCAGATCTCGATTTAGTCGCTGCAAACATCATAAAGGGAGGCTTTTCTTACAGTGGCCAAAGGTGCACTGCCGTCAAGGTTGTTTTGGTAATGGAGTCCGTAGCAGATGCTTTGGTTGAGAAAGTAAATGCTCGGGTGGCTAAACTAACTGTCGGTGCCCCGGAAGACGACTCAGACATTACTCCTGTCGTGACCGAGTCGTCGGCAAATTTCATCGAAGGGTTGGTAATGGATGCAAAGGAAAAGGGAGCAACATTTTGCCAAGAGTACAGAAGAGAAGGCAACCTGATATGGCCCTTGTTGTTAGATAATATTAGACCTGATATGAGGATTGCATGGGAAGAACCCTTTGGACCAGTTTTACCAGTCATAAGAATCAGCTCCATCGAAGAAGGAATCCACCATTGCAATGCTAGCAACTTTGGACTTCAGGGATGTGTCTTCACAAAAGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGGACAGTTCAAATCAACTCTGCCCCCGCTCGAGGACCCGATCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGCTCTCAAGGAGTGACCAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTGATCAACTTGCCAACGCCTTCCTACACCATGGGTTAG 1605 45.67 IHPRTPLFSSLQFLLLSQRISPQIPQFPQSPFLFSSFSMAGNGVFAEILDGEVYKFYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNQVMEIAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRLLGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFTGGDTGIAISKKAGMIPLQMELGGKDACIILEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDNIRPDMRIAWEEPFGPVLPVIRISSIEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMG 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10948062 10952364 - Carg17446-RA Car12g01124 158740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car12g01124 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Car12g01124 534 Pfam Aldehyde dehydrogenase family 62 521 IPR015590 GO:0016491
Car12g01124 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g01124 Car-Chr12:10948062 Car11g00103 Car-Chr11:583895 5.88E-58 dispersed
Car12g01124 Car-Chr12:10948062 Car05g01162 Car-Chr5:11076844 4.36E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car12g01124 K00131 - csv:101208699 961.829