Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car12g01250 | ATGAAGATAGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGATGAAATCGGTAGCGGTCAGATTGTGAAGGTGGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCTTGTTCTACCCTACCCTTTTCTACAACGTTCTTCGTAATAAAATGGAAGCCGAATTTAGATGGTGGGATGAAGTCGATCAGTTTCTTCTGCTGGGTGCAGTGCCGTTCCCCAAACACGTGCCGAGATTGAAGAAGCTCGGTGTTGGCGGCGTGATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTACAAATCCCCACCAGAGATTACTGTTTTGCTCCTAAATTTTCTGATATTAAACGAGCTGTGGACTTCATTCACAGAAATGCATCGTCTGGTAAAACGACATACGTCCACTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCGTCTGCCGCCCTGGAATATGTGCGCTCGAGAAGACCACGCGTGTTGCTCGCCCCATCGCAATGGGAGGCTGTTCAAGAATACAGCAACCGTCGTCCAGCTACAAGTTCCAGCTCACCCTCAGGAGGAGATGCGGTGCTCATTACGAAAGACGATCTAGAAGGATATCATGGTACGTGCATCGACGGTGTGGGTAGACAACTTGCAGTTGTCCCTAGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAGTTCACGGCAGTAGTGGATCTCTCATTAAGCGTCTGCCCGTGTCGGAGGCT | 843 | 48.16 | MKIVELEDAGTDREDEIGSGQIVKVDAKRALVGAGARILFYPTLFYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKHVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLQIPTRDYCFAPKFSDIKRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNRRPATSSSSPSGGDAVLITKDDLEGYHGTCIDGVGRQLAVVPRMGKSKPMIARLSCLFSSLIVHGSSGSLIKRLPVSEA | 281 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11791497 | 11793713 | + | Carg18605-RA | Car12g01250 | 158866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car12g01250 | 281 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311|GO:0016791 | |
Car12g01250 | 281 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 206 | IPR020422 | GO:0006470|GO:0008138 | |
Car12g01250 | 281 | Pfam | Dual specificity phosphatase, catalytic domain | 81 | 202 | IPR000340 | GO:0008138|GO:0016311 | |
Car12g01250 | 281 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 127 | 195 | IPR000387 | GO:0016311|GO:0016791 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car05g01293 | Car12g01250 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g02426 | Car-Chr4:19356787 | Car12g01250 | Car-Chr12:11791497 | 5.16E-06 | dispersed | |
Car05g00972 | Car-Chr5:9270867 | Car12g01250 | Car-Chr12:11791497 | 1.74E-98 | dispersed | |
Car12g01250 | Car-Chr12:11791497 | Car16g01057 | Car-Chr16:9093168 | 1.55E-100 | dispersed | |
Car12g01250 | Car-Chr12:11791497 | Car05g01293 | Car-Chr5:11911778 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car12g01250 | - | - | bhj:120080407 | 533.872 |