Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00010 ATGGTTGACAACGGCGAGGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCTGATGATATTCTTCACATTTTCTCCAATTTTGATGCTAGGTTTTCCCTCGATAAGTTGTCTGATAAGCCCGATGAGCTTGATCCCAGAGGCTCCGCCGATTTGCATCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGTCGCCGACCATCCAATTTGGGCTGACTCTGCTGATTCCTCTGCGTTTCTTGACGCTATCGATGAGTTGATGGCAATCATTAGGGACTGGACGCCGATGGCTAGGGATAAGTCTGTTGGGAACTACCTTGCTCGCGCTGACGATCTGATGCAGCAGGCGATGTTCCGCGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAACTTACTCGTCATTTCAGGAACGGCGAGTCAACTGGTGATTTCTGCTTCGATTCTGAGGAAGATGAGGATGTTGCGGAAGGAATTCTTGGCGATGGTCTCCAGATCCCTGTGGCGCAGCCGGTGATGGACTACAACATCGTTATCGACGCGCTTCCGTCGGGGACTATCGGCGATCTCCATGAGATAGCGAAGCGTATGGTTGCGGCTGGGTTCGAGAAGGAGTGCTCGCACGCTTACAGTAGCTGCAGGAGGGGGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAACTGAGCATCGATGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTAGCGTCTCCCTTCGAGTTCTCTTCCCAAGCGAACGACACCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCACCGCTAATCTCTCTTTCATGGAGGTCTGTCGAGGATCGACGATCCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGCTCCCGCGCCCCAGAACGACTCTTCAAAATTATAGATATGTTCGAAACCTTGAGAGACTTGATGCCAGAGTTCGATTCAGTATTTCCAGACCAGTACTGTTCGTTTCTTAGAAATGAAGCACTCACAATCTGGAAAAGTTTTGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGTCGTGATCCGGCTAAGACTCCGGTGCCGGGGGGTGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAATCGCGGCAGACTCTGGAGCAAGTTTTCGAAGAAGTCGCTTTTACCTCCAAGGACTACAGCAAGCTCGAGGACAGAGCAGCAGCATCATCATCGTCATCGTTGTCAGTTCAAATGGAGTGGATTATGGAGGTTTTAGAGAGCAATTTAGAGGCGAAGTCCAAGATATACAAGGATCTTTCCTTGAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTCCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGTGAGGATTGGATTCGAAAGCACTCCGTTAAAAACCGGCAATACCTTGGGAATTACCTGAGAAGCTCATGGAGCAAGGTGATCGGAGTGTTGAAAGTGGACAGTGGCTCTTTAGCTCCGGCTGCGATGAAGGAGAAGCTCCAATCATTCAACGTGCAGTTTGAACAAGTCTGCCAAACCCAATCCACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTCGCCAAAACCCTGTTGCCGGCATATCAAAAGTTCGTCGGAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGACCGGTATTTGAAGTACACGGTGGAGGATGTGGAGGGTCGAATCACCGAGCTGTTCGAAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGCGGCGGAAGGAGGTGA 1920 50.31 MVDNGEEKLLAMARHIAKTMGRNESMADDILHIFSNFDARFSLDKLSDKPDELDPRGSADLHRSLKSLDRRISQYLVADHPIWADSADSSAFLDAIDELMAIIRDWTPMARDKSVGNYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEDVAEGILGDGLQIPVAQPVMDYNIVIDALPSGTIGDLHEIAKRMVAAGFEKECSHAYSSCRRGFLEESLSRLGLQKLSIDEVQKMQWHDLEEEIERWMKAISVSLRVLFPSERHLCERVFVGLSSTANLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKIIDMFETLRDLMPEFDSVFPDQYCSFLRNEALTIWKSFGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQVFEEVAFTSKDYSKLEDRAAASSSSSLSVQMEWIMEVLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLRSSWSKVIGVLKVDSGSLAPAAMKEKLQSFNVQFEQVCQTQSTWVIFEHQLREEARISVAKTLLPAYQKFVGRYQSLPELAKRTDRYLKYTVEDVEGRITELFEGGGGGGGGGGGGRR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 108030 109949 - Carg26954-RA Car13g00010 158927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00010 639 Pfam Exo70 exocyst complex subunit 266 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00642 Car13g00010 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00010 Car-Chr13:108030 Car18g00228 Car-Chr18:1303178 2.64E-126 dispersed
Car01g00642 Car-Chr1:3785199 Car13g00010 Car-Chr13:108030 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00010 K07195 - csv:101204511 1106.66