Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00020 ATGTCGTCGACCACCGAGAAACCCGAACTCGTCTGCGTCACCGGCGGCAGTGGCTGTATTGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCGTCCAAAATCTCAAGGATGAGAACGAAACGAAGCATCTGGAGGCTTTAGAAGGAGCGGATGCTCGTCTTCGTCTCTTCCAAATTGACCTCCTCGATTATGACTCCATTGCCGCCGCCGTCTCTGGTTGCGCCGGCGTCTTCCACGTTGCGTCTCCCTGCATTGTTGACCCTGTAGAAGATCCTGAGAGGGATTTACTGGATCCGGCTATCAAAGGAACTATCAATGTCCTGACGGCGGCTAAGGAGGCTGGGGTACAACGCGTAGTGGTAACTTCTTCTATCTCCGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGCAATAAATGAAGAATGCTGGACAGATATTAATTACTGCAAGCAAAAGGGGCTGTGGTATTCAGTTTCAAAAACTCTAGCAGAAAAGGCTACTTGGGATTTTGCCAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGGATTAATGCTAGCATGCAAATGCTTTTAAAACTGCTCAAGGGGTGCAATGAGACATTTGAGGACGTCTTTATCGGAGTTGTGCATTTTAAGGATGTTGCATTAGCACATATTTTGGTGTATGAAAACAAATCAGCAACAGGAAGACACTTTTGTGCTGAGGCCATAGCTGGTTACTCGGACTATGCTGCCAAGGTTGCTGAACTCTTCCCTCAGTATGAGGTGCCCAGGTCGATAGAAGATACACAACCTGGTTTGGTGAGAACAAAAGATGGAGGTAATAAGTTGATGAAGCTGGGGCTGGAATTCATCCCAATGGAACAAATCCTCAAGGACGCCGTTGAGGATCTAAAAAAGAAGGGATATATCTCCTGA 981 48.73 MSSTTEKPELVCVTGGSGCIGSWLVHLLLLRGYSVHATVQNLKDENETKHLEALEGADARLRLFQIDLLDYDSIAAAVSGCAGVFHVASPCIVDPVEDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVAINEECWTDINYCKQKGLWYSVSKTLAEKATWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLKGCNETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIAGYSDYAAKVAELFPQYEVPRSIEDTQPGLVRTKDGGNKLMKLGLEFIPMEQILKDAVEDLKKKGYIS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 212491 215401 + Carg26037-RA Car13g00020 158937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00020 326 Pfam NAD dependent epimerase/dehydratase family 11 253 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01443 Car-Chr1:12412256 Car13g00020 Car-Chr13:212491 8.64E-16 dispersed
Car04g00812 Car-Chr4:4725390 Car13g00020 Car-Chr13:212491 1.08E-110 dispersed
Car13g00020 Car-Chr13:212491 Car14g00958 Car-Chr14:5872273 3.50E-93 dispersed
Car13g00020 Car-Chr13:212491 Car14g00956 Car-Chr14:5815604 7.22E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00020 - - csv:101204420 587.03