Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00052 ATGGCCAACGACGTCGTTTTCCCCTTCCCCACTTTTTTTCTCACTCTCTTTCTCACCTATTTGATTTGGTTTTATTTCCTCGCCCGTAAGCTCACCGGTCCAAGAGTATGGCCGGTCATCGGCAGTCTACCGGCTCTTTTCTCGAACCGGCAGAGACTCCATGACTGGATGGCCGGGAACCTCCGCGACACAGGCGCCGCTGCCACGTACCAAACCTGCACAGTGGCGGTTCCATTCATAGCTAAAAAGCAAGGATTTTACACTGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTGCGAACCCGGTTCGAAAATTACCCTAAAGGACCGGACTGGCAAGCGGCTTTTCACGATTTACTGGGACAGGGGATTTTCAACAGCGACGGCGAAATTTGGCTGATTCAGCGGAAAACGGCGGCGCTGGAGTTCACGACGAGGACGCTCCGGCAGGCGATGGATCGGTGGGTTAATCGGACGATAAGGACGCGACTGTGGTGCATTTTGGACAAGGCGGCGGAGTATAAGACGGCGGTGGATTTGCAGGATTTGTTGCTCCGGTTGACTTTTGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCTGAAACTCTGTCGCCGGAATTGCCTACAAACTCCTTCGCTTTGGCCTTTGACACCGCCACTGAGGCCACTCTCCAGCGCCTTCTTTACCCTGGTCTTATATGGAGGTTCGAGAAGCTTCTGGGGATTGGAATGGAAAGAAGGTTGAAGAAGTGTCTGAAAGTGGTAGAAGAATACATAAACGACGCCGTTGCAGCCCGTAAAGAATCTCCCTCAGACGACTTATTATCACGCTTCATGAAGAAGCGCGACGACGACCGCTTCTCCGCCACCGTGCTCCACCGCATCGCATTAAACTTCGTCCTCGCCGGTCGGGACACCTCCTCCGTCGCCCTCACCTGGTTCTTTTGGCTCGTAATGAACCACCCACACGTAGAGGAAAAAATCCTCACCGAAATCTCAACGGTCCTCCGTCAAACACGTGGCGACGATATGCGCCGTTGGATCGAAGAGCCGTTGGTGTTCGACGAGGCCGACAAATTGGTGTACTTAAAAGCCGCATTGGCTGAAACGCTTCGTTTATACCCGTCCGTACCACAGGATTTCAAATATGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTTGTGCCGGCCGGTTCGACTGTGACGTATTCGATTTATTCGGTCGGGAGAATGAAGAGCATTTGGGGGGAGGATTGTGAGGAATTTAAACCGGACCGGTGGTTATCGCCGACCGGGGACCGGTTCGAGGGGCAGAAGGATGTGTATAAGTTTGTGGCGTTTAATGCTGGACCGAGGACTTGTTTGGGGAAGGATTTGGCTTATTTGCAGATGAAGTCCGTCGCCTCTGCCGTACTCCTCCGGTACCGGTTGGCGCCAGTTCCCGGTCACCGGGTGGAACAAAAGATGTCTCTCACTCTTTTTATGAAGAATGGGCTTCGTGTTTATTTGCATCCCCGCCGGCTCGGCTAG 1539 53.02 MANDVVFPFPTFFLTLFLTYLIWFYFLARKLTGPRVWPVIGSLPALFSNRQRLHDWMAGNLRDTGAAATYQTCTVAVPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILDKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPETLSPELPTNSFALAFDTATEATLQRLLYPGLIWRFEKLLGIGMERRLKKCLKVVEEYINDAVAARKESPSDDLLSRFMKKRDDDRFSATVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKILTEISTVLRQTRGDDMRRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCEEFKPDRWLSPTGDRFEGQKDVYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 414784 416322 - Carg20612-RA Car13g00052 158969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00052 512 Pfam Cytochrome P450 88 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car13g00052 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00599 Car13g00052 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00052 Car-Chr13:414784 Car15g01112 Car-Chr15:8779782 0 dispersed
Car01g00599 Car-Chr1:3506203 Car13g00052 Car-Chr13:414784 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00052 K15401 - csv:101214516 960.674