Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car13g00102 | ATGGAGGAAGAAAACGGCGCTCTGATTCAGAGCCTGATTGATGTAGTGAATGAGATTGCTTGGATCTCGGATTTTAGGCATACTGTCAAGAAGCAGTACTGCAATTTGTCCAGGAGATTGAAGCTTTTGATCCCAATGTTTGAAGAGATTAGGGATAGCAAAGAGCCAGTCCCCGAGGATACTCTCAAGGCTCTCGTATTGTTGAAAGAAGCTCTCGAATCGGCTAAGAAGTTGCTCAGATTTGGAAGCGAGGGGAGCAAGATTTTCCTGGCCATAGAGAGGGAGCAAATTATGAACAAATTTCATGAGGTAACCGCTCGGTTGGAACAAGCTTTGGAAGGAATAGCCTACTATAAACTTGATATATCCGATGAAGTTAAAGAGCAGGTCGAGCTTGTTCTTGCTCAGTTCAGAAGAGCCAAAGGCAGGGCCGATGTTCCTGACTCTGAGTTATTGGATGATATCTCTGCCCTTTATAACACGAGCAATGATTCTTCTATAGATCAAGATCGGCTGAGGAGACTGTCCGAAAAATTACAGTTATTAGGAATATCCGATCTTGCACAAGAGTCAATAGCTTTGCATGAGATGGTTACTGCTACTGATGGAGATCCAGGTCAAAGCATTGAGAAGATGGCAGGGCTGCTGAAGAAAATAAAAGATTTCGTGCAAACGGAGAACCTTGAAATGGACGATCCTGGTACAGAAAAGAATTCTCCAGCAAGTTGTAGTGGACAAATATCCAATGAGAAAAATAACAAGGCCCCAATTATACCAGATGATTTTCGCTGCCCCATATCCCTGGAGTTGATGAGAGATCCTGTCATTGTCTCAACTGGACAGACCTATGAACGTTCCTGCATTGAGAAGTGGCTTGAATCCGGGCATGGGACGTGTCCGAAGACACAACAGAAACTTTCAAGCACTACTCTTACACCAAATTATGTGTTGCGTAGCCTTATAGCCCAGTGGTGCGAGGCTAATGGTATCGAACCACCAAAACGACCCAGTAGTGCTCGACCGTGTAGAAGCTCGTCCTCTTGCTCACCTGCTGAACGCACAAAGATTGATATTCTTCTTTGCAAACTTGCATCTGGAAATCCTGAAGATCAACGATCTGCAGCTGGTGAGATCCGACTTCTTGCAAAACGGAACGCAGACAATCGTGTTGCTATAGCTGAGGCTGGTGCAATACCTCTCCTTGTCGGCCTTCTTTCAACTCCCGACTCCCGTGTTCAAGAGCATGCTGTGACAGCACTTCTTAACCTCTCTATATGTGAGGACAACAAGGGAAGCATCATTTCCTCTGGGGCAGTTCCTGGTATTGTTCTCGTTCTCAAGAAGGGGAGCATGGAAGCTCGGGAGAATGCTGCAGCCACTCTTTTCAGCCTTTCAGTGGTGGATGAAAATAAAGTTCGAATCGGTGCCTCCGGAGCTATCCCGCCGCTCGTCACGCTGCTCAGTGAAGGCACACAAAGAGGTAAGAAAGATGCTGCAACTGCTCTTTTCAACTTGTGCATCTACCAAGGAAACAAGGGAAAGGCAGTAAGAGCTGGCGTTGTTCCAACCTTGATGCAGCTTCTCACTGAACCTGGAACAGGAATGGTGGATGAAGCCTTAGCCATCTTAGCAATACTTGCCAGCCATTCCGAAGGGAAAGCTGCCATCGGATCTGCAAAGGCGGTACCAGTTTTGGTCGATGTTATCGGTACAGGATCACCGAGGAACAGAGAGAATGCAGCTGCAGTTCTCGTGCACCTTTGCTCAGGAGACGAGCAACACCTAGTAGAGGCCAGAGATCTTGGAGTGATAAGTTCATTGATAGATTTGGCACGCAGTGGCACTGACAGAGGAAAGCGAAAAGCTGCTCAGTTGCTTGAGCGAATGAACCGACTCTTCGAGCACGCAGCGCACCCGGAGGAGATTCGAGTGCTTCGGTTGCAAGCACCGGAGTCTCGACCTCAAAACCAGGCATCACAATCAACCTCCACCACGGAAGTCGTCGGTAGCTGA | 2013 | 47.49 | MEEENGALIQSLIDVVNEIAWISDFRHTVKKQYCNLSRRLKLLIPMFEEIRDSKEPVPEDTLKALVLLKEALESAKKLLRFGSEGSKIFLAIEREQIMNKFHEVTARLEQALEGIAYYKLDISDEVKEQVELVLAQFRRAKGRADVPDSELLDDISALYNTSNDSSIDQDRLRRLSEKLQLLGISDLAQESIALHEMVTATDGDPGQSIEKMAGLLKKIKDFVQTENLEMDDPGTEKNSPASCSGQISNEKNNKAPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLESGHGTCPKTQQKLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSARPCRSSSSCSPAERTKIDILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHSEGKAAIGSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQHLVEARDLGVISSLIDLARSGTDRGKRKAAQLLERMNRLFEHAAHPEEIRVLRLQAPESRPQNQASQSTSTTEVVGS | 670 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 732289 | 736948 | + | Carg20663-RA | Car13g00102 | 159019 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car13g00102 | 670 | MobiDBLite | consensus disorder prediction | 237 | 253 | - | - | |
Car13g00102 | 670 | Pfam | Armadillo/beta-catenin-like repeat | 550 | 589 | IPR000225 | GO:0005515 | |
Car13g00102 | 670 | Pfam | Armadillo/beta-catenin-like repeat | 385 | 424 | IPR000225 | GO:0005515 | |
Car13g00102 | 670 | Pfam | Armadillo/beta-catenin-like repeat | 468 | 506 | IPR000225 | GO:0005515 | |
Car13g00102 | 670 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 396 | 438 | IPR000225 | GO:0005515 | |
Car13g00102 | 670 | MobiDBLite | consensus disorder prediction | 650 | 670 | - | - | |
Car13g00102 | 670 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 519 | 561 | IPR000225 | GO:0005515 | |
Car13g00102 | 670 | Pfam | U-box domain | 258 | 328 | IPR003613 | GO:0004842|GO:0016567 | |
Car13g00102 | 670 | ProSiteProfiles | U-box domain profile. | 257 | 331 | IPR003613 | GO:0004842|GO:0016567 | |
Car13g00102 | 670 | MobiDBLite | consensus disorder prediction | 648 | 670 | - | - | |
Car13g00102 | 670 | MobiDBLite | consensus disorder prediction | 229 | 254 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car13g00102 | Car20g00358 | CCT | |
Car01g00541 | Car13g00102 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g00452 | Car-Chr3:4961677 | Car13g00102 | Car-Chr13:732289 | 4.92E-60 | dispersed | |
Car04g00936 | Car-Chr4:5378929 | Car13g00102 | Car-Chr13:732289 | 1.49E-166 | dispersed | |
Car04g01459 | Car-Chr4:8467132 | Car13g00102 | Car-Chr13:732289 | 0 | dispersed | |
Car04g02783 | Car-Chr4:21325819 | Car13g00102 | Car-Chr13:732289 | 1.31E-123 | dispersed | |
Car07g00243 | Car-Chr7:1326806 | Car13g00102 | Car-Chr13:732289 | 1.00E-59 | dispersed | |
Car13g00102 | Car-Chr13:732289 | Car18g00828 | Car-Chr18:9305016 | 0 | dispersed | |
Car18g00408 | Car-Chr18:2545138 | Car13g00102 | Car-Chr13:732289 | 2.70E-98 | dispersed | |
Car01g00541 | Car-Chr1:3209827 | Car13g00102 | Car-Chr13:732289 | 0 | wgd | |
Car13g00102 | Car-Chr13:732289 | Car02g00586 | Car-Chr2:4455461 | 2.32E-18 | wgd | |
Car13g00102 | Car-Chr13:732289 | Car20g00358 | Car-Chr20:2013808 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car13g00102 | - | - | csv:101218572 | 1121.69 |