Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car13g00117 ATGGGTAGAGGGGGGGAAAACTACGGGAAGAAAGACATTTTTGCTGCTACATCTTCGAAGAAAGAGACGTACCCTGCCTGGGCAAGGGATGTTCAAGAATGCGTAGAGAAGTACCAAGTGAATCCAGATCTCGGATTATCTTCTGAAGAGGTTGAGAACAAGAGAAAGATCTATGGTTTCAATGAATTGGAGAAGCATGAAGGTACCTCAATCTTGAAACTTATTTTGGAACAATTTAATGACACACTAGTTAGGATTCTATTAGCTGCAGCAGTTGTATCTTTTGTGCTTGCGTGGTATGATGGCGAGGAAGGAGGTGAGATGGAGATCACCGCATTTGTGGAGCCTCTAGTTATTTTCTTGATACTGATCGTCAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCTGAGAAAGCATTGGAAGCCCTTAAAGAAATCCAGTCTGAACAGGCTTCAGTAATACGAAATGGTAAACGAGTTTCGATTGTTGCAAAAGATCTTGTTCCCGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTATTGCGTTTAATCAGCTCAACTTTTCGGGTTGAGCAAGGTTCCTTGACAGGCGAGAGTGAAGCGGTGAGCAAGACTGCTAAGGCAGTGCCAGAAGATACCGATATTCAAGGGAAAAAGTGTATGGTTTTTGCAGGGACAACAGTTGTCAATGGAAATTGTATTTGCGTTGTTACCCAAATAGGAATGAACACTGAACTAGGACAGGTGCATGCTCAGATACAAGAAGCATCCCAGAGTGAAGATGATACGCCATTGAAGAAAAAGTTGAATGAGTTTGGAGAGCTTCTAACAGCAATAATTGGAGTGATCTGTGCTCTAGTTTGGCTTATTAATGTCAAATACTTCCTCACTTGGGAATATGTTGATGGGTGGCCTGCAAATTTCAAGTTCTCATTTGAGAAATGTACATATTACTTTGAGATTGCTGTGGCATTGGCTGTAGCTGCAATTCCAGAAGGTTTGCCTGCGGTCATAACAACATGCTTGGCACTTGGCACTCGAAAGATGGCTCAAAAGAATGCCCTTGTTCGGAAGCTTCCCAGTGTTGAAACACTTGGCTGTACAACTGTGATATGTTCTGATAAGACCGGTACTCTAACAACTAATCAGATGGCTGTGGCGAAAATTGTGGCCCTTGGTTCTCGTGTTGGCACTCTGCGAGCTTTTGATGTGGAGGGGACTACATATGATCCTTTAGATGGAAAGATAATTGGTTGGCTTGGAGGTCAACTGGATGCTAATCTGCAAATGTTGGCAAAGATCGCTGCTGTCTGTAATGATGCAGGTGTTGAAAAATCTGGCCATCATTTTGTTGCAAATGGAATGCCTACTGAAGCAGCATTGAAGGTTCTTGTGGAAAAGATGGGGCTTCCTGAAGGATATGACTCAAGTTCAGCTGACATTAATGGGGATGTGCTGCGATGCTGCCACGCTTGGAATAAGAACGAGCAACGCATTGCTACTCTAGAGTTTGACCGAGACCGTAAATCCATGGGAGTTATTACAACTTCTAGCTCAGGGAAGAAATCATTACTCGTGAAGGGTGCTGTTGAAAACCTTTTGGATCGGAGTTCATTTATTCAACTGCTTGATGGAACTATAGTGAAGTTGGACTCAGATTCGAAGAGATACCTCTTAGATTATTTGCGTGAGATGTCATCAAGTGCATTAAGGTGTTTAGGTTTTGCATACAAGGAAGATCTTCCAGAATTTTCCTCTTATAATAACGGTGATGAAGAACATCCAGCACACCAGCTTCTACTTGACCCGTCCAAATACTCCACAATCGAAAGTAATCTTATCTTTGCGGGCTTTGTTGGGTTAAGGGATCCTCCTCGAAAAGAGGTTCATCAAGCAATTGAAGACTGCAAAGCTGCTGGTATTCGTGTCATGGTTATCACAGGGGACAACCAGAATACAGCTGAAGCTATATGTCGAGAAATAGGCGTATTTGGAAAACATGAAGCTATAAATTCCAGAAGTTTAACTGGAAAAGAGTTCATGGCAATGAATCGGGAGGGTCAAAAACTTCATTTAAGACAAGATGGAGGACTTCTTTTCTCAAGGGCTGAACCAAGACATAAACAAGAGATAGTGAGATTGCTCAAGGAAGACGGTGAAGTTGTTGCAATGACCGGTGATGGAGTCAATGATGCGCCTGCCTTGAAGCTGGCCGATATCGGGATTGCGATGGGCATTGCTGGTACCGAGGTTGCAAAGGAAGCCTCCGACATGGTTCTTGCAGATGACAATTTTAGTACAATAGTTGCAGCAGTTGGTGAAGGCAGGTCCATTTACGACAATATGAAGGCTTTTATCAGGTACATGATTTCCTCAAATATTGGTGAAGTTGCATCTATATTTTTGACAGCAGCACTGGGTATCCCCGAGGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTCGTTACAGACGGACCCCCGGCAACTGCGTTGGGATTTAATCCACCTGATAACGATATAATGAAGAAACCGCCAAGAAAGAGCGACGACTCGTTGATCACAGCCTGGATTTTGTTCCGCTATTTGGTGATTGGACTTTACGTAGGGGTAGCAACTGTAGGAGTATTTATTATTTGGTATACACATGCATCATTCTTAGGCATCGACCTGTCTGGAGATGGCCACAGTCTGGTCTCTTACTCTCAGCTCGCTAACTGGGGTCAGTGCTCATCTTGGGACGGGTTTTCGGTGTCGCCCTTCACAGCTGGGGATGACGTCTTCAGCTTTGATTCGGATCCATGCGATTACTTCCGCTCAGGCAAGATCAAAGCATCAACCCTGTCTCTCTCCGTCTTGGTAGCCATAGAGATGTTCAATTCCCTCAATGCCCTCTCCGAGGATGGAAGCTTGTTGACAATGCCCCCTTGGGTTAACCCTTGGCTCCTCCTCGCCATGTCTGTTTCGTTCGGCTTGCATTTCTTGATTCTGTACGTGCCATTCCTCGCCAAGATCTTTGGCATCGTCCCGCTGTCGTTGAACGAATGGCTCTTGGTTCTGGCGGTGGCATTGCCCGTGATCATAATCGACGAGATTCTGAAATTTGTGGGAAGGCTTACAAGTGGGTTGAGGACTTCTCGCCCGAGGAGATCATCGAAGCAGAAATCGGAGTAA 3198 44.72 MGRGGENYGKKDIFAATSSKKETYPAWARDVQECVEKYQVNPDLGLSSEEVENKRKIYGFNELEKHEGTSILKLILEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEALKEIQSEQASVIRNGKRVSIVAKDLVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKAVPEDTDIQGKKCMVFAGTTVVNGNCICVVTQIGMNTELGQVHAQIQEASQSEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWEYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPLDGKIIGWLGGQLDANLQMLAKIAAVCNDAGVEKSGHHFVANGMPTEAALKVLVEKMGLPEGYDSSSADINGDVLRCCHAWNKNEQRIATLEFDRDRKSMGVITTSSSGKKSLLVKGAVENLLDRSSFIQLLDGTIVKLDSDSKRYLLDYLREMSSSALRCLGFAYKEDLPEFSSYNNGDEEHPAHQLLLDPSKYSTIESNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAICREIGVFGKHEAINSRSLTGKEFMAMNREGQKLHLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDNDIMKKPPRKSDDSLITAWILFRYLVIGLYVGVATVGVFIIWYTHASFLGIDLSGDGHSLVSYSQLANWGQCSSWDGFSVSPFTAGDDVFSFDSDPCDYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKIFGIVPLSLNEWLLVLAVALPVIIIDEILKFVGRLTSGLRTSRPRRSSKQKSE 1065
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1022047 1027384 + Carg21023-RA Car13g00117 159034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car13g00117 1065 Pfam Cation transporting ATPase, C-terminus 818 1044 IPR006068 -
Car13g00117 1065 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Car13g00117 1065 Pfam E1-E2 ATPase 147 360 - -
Car13g00117 1065 Pfam haloacid dehalogenase-like hydrolase 377 747 - -
Car13g00117 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00528 Car13g00117 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00547 Car-Chr12:3620443 Car13g00117 Car-Chr13:1022047 0 dispersed
Car13g00117 Car-Chr13:1022047 Car05g00682 Car-Chr5:4528221 2.80E-110 dispersed
Car01g00528 Car-Chr1:3084223 Car13g00117 Car-Chr13:1022047 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car13g00117 K01537 - csv:101206729 1994.16